Pairwise Alignments

Query, 319 a.a., IS110 family transposase from Rhodopseudomonas palustris CGA009

Subject, 321 a.a., transposase of insertion sequence ISRm19 protein from Sinorhizobium meliloti 1021

 Score =  177 bits (450), Expect = 2e-49
 Identities = 118/304 (38%), Positives = 169/304 (55%), Gaps = 2/304 (0%)

Query: 10  AAGVDAGQRFLDVALAPSGQTFRMPNLAEGIAEIIARLERSGVRRVVLEAIGPYAEPLVK 69
           AAG+D G+ +LDVA  P     ++PN A+G   +   LER G+ RV +EA G Y   ++ 
Sbjct: 8   AAGIDTGKIWLDVATYPVSDKQKVPNNADGWQTLADWLERQGIGRVGIEASGGYERDVIA 67

Query: 70  ALSVAGFEVGIVNPRRIKAFREAEGSRAKTDRLDARLIARFALTMPETLRPLPTDTQLEL 129
            L   GFEV ++ PR+++AF   +  RAK D+LDA LIA  A          P    +  
Sbjct: 68  YLHQRGFEVVLLQPRQVRAFGLYKLRRAKNDQLDAALIAECAARSDARCHA-PDSRLIAF 126

Query: 130 KALSLRRRQLTEMIAMEKTRMKQVRGTLLLDSHRAAIAALSAQCQAIEAELAKRIGDDAE 189
               L   Q+   IA  KTR ++     +L+    +I  L ++C+A  A L   + +  +
Sbjct: 127 GEWLLFIEQIEADIACLKTRRERFTDRWILEEIDRSIGELKSRCKAQLALLQAAVREHDD 186

Query: 190 LRRVLHILKSIPGIGERVATLLITDLPELGQRDRKAIASLAGLAPHVSQSGAAPPRAAIA 249
           L R L +++SI GIG R A  L+  +PELG+ DR+ IA+L G+AP+  QSG       IA
Sbjct: 187 LARKLDLIESIDGIGIRTALTLVILMPELGRVDREEIAALTGVAPYDDQSGKREGERHIA 246

Query: 250 GGRPCVRAALYMAALVAA-RHHPKLRDDYNALRLQGKPGKVALIAIARKLLVTANALVKA 308
           GGR  VR AL+ AAL A+ R +  L + Y+ L  +GK  K ALIA  RKL++ AN +VK 
Sbjct: 247 GGRARVRRALFNAALPASQRWNETLVELYDRLTAKGKSHKAALIACVRKLIIFANTVVKR 306

Query: 309 DTPY 312
            TP+
Sbjct: 307 QTPW 310