Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  145 bits (367), Expect = 7e-40
 Identities = 83/243 (34%), Positives = 127/243 (52%), Gaps = 2/243 (0%)

Query: 17  DEVARPVVAYGMASAMIGSFQLDMHCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIP 76
           D + RP+ A   + ++        H H   Q+     G L    + G ++ PP+ A+ IP
Sbjct: 18  DALPRPLFA--RSESLAERTTTPRHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIP 75

Query: 77  GGALHAIRATGRLEGYSAFVAAGIDVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQDAA 136
            G LH + ++ + E  S ++   +    P  C  ++V+PLLREL+     LP+ YD+  A
Sbjct: 76  PGLLHEVISSPQTEMRSLYIDQRVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGA 135

Query: 137 TSRLIAVLLDEIAAARIEDLHLPMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSERT 196
             RL AV+LD++ AA      LP P D RLR + + +   P    SL  W+ R  +SE+T
Sbjct: 136 DGRLAAVILDQLRAAPELSYSLPWPDDARLRGICEALYEQPDLSLSLAQWSERLHISEKT 195

Query: 197 LGRLISRETGMSFGRWRQQLGVMLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGT 256
           L R   R+TG+SF  WRQ+L ++ A+  L  G  +  VA   GYES  +F+  F +  GT
Sbjct: 196 LTRQFQRDTGLSFRAWRQRLRLLSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGT 255

Query: 257 SPG 259
           +PG
Sbjct: 256 TPG 258