Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 261 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  166 bits (420), Expect = 5e-46
 Identities = 86/223 (38%), Positives = 127/223 (56%), Gaps = 2/223 (0%)

Query: 41  HCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGGALHAIRATGRLEGYSAFVAAGI 100
           H HA+GQ+    RG +S  V+ G+W+VP   AVW+P   +H  R+ G  +G+S ++A   
Sbjct: 35  HHHARGQLFGSTRGLVSVSVEAGVWVVPAIHAVWLPPNHVHWGRSHGPFDGWSVYIAPAA 94

Query: 101 DVGLPQRCCAVSVTPLLRELLFRAARLPL--LYDQDAATSRLIAVLLDEIAAARIEDLHL 158
              LP   C +  + LLRE + RAA  PL      D   + + AVLLDEI    +E   L
Sbjct: 95  CQDLPSSPCTIRTSGLLREAVLRAATWPLEPFVPLDEQKAHVAAVLLDEIRNLPVEPFGL 154

Query: 159 PMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSERTLGRLISRETGMSFGRWRQQLGV 218
           P+P DPRL  +A  ++A PA+    E WA  A +S R+LGR    ETG +F  WRQ+  +
Sbjct: 155 PLPRDPRLERIARALIADPADERDFEAWARWAAISPRSLGRRFVTETGFTFTAWRQRARL 214

Query: 219 MLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGTSPGRY 261
           M +++ LA    +  +A DLGY +  +F+++FR+T G +P  Y
Sbjct: 215 MRSLEMLATDLPVTTIALDLGYATASAFISLFRRTFGETPAVY 257