Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  181 bits (460), Expect = 1e-50
 Identities = 95/223 (42%), Positives = 130/223 (58%), Gaps = 2/223 (0%)

Query: 41  HCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGGALHAIRATGRLEGYSAFVA--A 98
           H H   Q++    G        G W+VPP  AVW+P G  H +RA    +  S +V   A
Sbjct: 23  HSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIEA 82

Query: 99  GIDVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQDAATSRLIAVLLDEIAAARIEDLHL 158
               GLP+ C  V+V+PL REL+    R P  YD+D A  RL+ VLLD+IAA   + LHL
Sbjct: 83  AQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLHL 142

Query: 159 PMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSERTLGRLISRETGMSFGRWRQQLGV 218
           P P DPR  A+A  + A PA+   LE WA  AG S RTL R    + G++FG+WR +L +
Sbjct: 143 PWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLRL 202

Query: 219 MLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGTSPGRY 261
           + A++ LA G ++  VA D+GY+   +F+ MFR+ LGT+PG Y
Sbjct: 203 LGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAY 245