Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 278 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (497), Expect = 6e-55
 Identities = 103/251 (41%), Positives = 153/251 (60%), Gaps = 2/251 (0%)

Query: 15  EPDEVARPVVAYGMASAMIGSFQLDMHCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVW 74
           +PD    P VA  +  +   + ++  H H +GQ+++   GA++C    GLWIVPP SAVW
Sbjct: 20  DPDHWDGPAVALHVDFSDYEA-EVPHHRHRQGQLIMALHGAVTCTAANGLWIVPPGSAVW 78

Query: 75  IPGGALHAIRATGRLEGYSAFVAAGIDVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQD 134
           IPGG  H+ + T        FV     + LPQ CC +SV+P+LRE++ R A      +  
Sbjct: 79  IPGGVSHSNQVTANARLSYLFVEPEAAL-LPQDCCTLSVSPMLREMILRLADASGHDEPK 137

Query: 135 AATSRLIAVLLDEIAAARIEDLHLPMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSE 194
               RL+ V+LDE+A      L LP+   P++  +A  + A P +R +L  WA+   +SE
Sbjct: 138 DHRGRLVRVMLDELALMPTGGLKLPVSHHPKIAMIASALAAQPGDRRTLMEWASHVAMSE 197

Query: 195 RTLGRLISRETGMSFGRWRQQLGVMLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTL 254
           R+L RL+ +ETG+SFGRWR+QL +++A++ LA GAS+Q V+  LGYES  +F+ MF+K L
Sbjct: 198 RSLKRLMIQETGLSFGRWRRQLHLIVALRELASGASVQSVSLSLGYESATAFIVMFKKAL 257

Query: 255 GTSPGRYMAER 265
           GT+P RY+  R
Sbjct: 258 GTTPARYLPNR 268