Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (352), Expect = 3e-38
 Identities = 80/221 (36%), Positives = 112/221 (50%)

Query: 41  HCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGGALHAIRATGRLEGYSAFVAAGI 100
           H H + Q++    G +S + D G W+VPP  AVW+P    H   +   ++  S  +    
Sbjct: 26  HSHEEAQLLYAVSGVVSIKTDKGTWVVPPSRAVWLPPKLEHETTSRAGVQFRSLLIDPNG 85

Query: 101 DVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQDAATSRLIAVLLDEIAAARIEDLHLPM 160
             GLP  C  V +T LLREL+ + A L         T  ++ + L E++    + L+LP 
Sbjct: 86  IQGLPDACMVVEITSLLRELILKLAELAKTPGSRERTDAVVRLFLMELSFQPAQPLNLPT 145

Query: 161 PSDPRLRALADLMMAAPAERGSLEGWAARAGLSERTLGRLISRETGMSFGRWRQQLGVML 220
           P+ P L  L   M    AE  S+E  AA   +S  T  R   RETGMSFG WRQQ  ++ 
Sbjct: 146 PTHPDLARLCAKMREDLAEGVSVEDAAAMLYMSRATFMRFFKRETGMSFGHWRQQARMLD 205

Query: 221 AVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGTSPGRY 261
           A+  LA G SI  VA + GY S  +F  +FR++LG  P  Y
Sbjct: 206 ALVLLADGRSILDVALECGYSSPSAFSAIFRRSLGRPPSAY 246