Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 256 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (416), Expect = 1e-45
 Identities = 93/247 (37%), Positives = 137/247 (55%), Gaps = 9/247 (3%)

Query: 19  VARPVVAYGMASAMIGSFQLDMHCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGG 78
           V RP+ A  M+ A   +  + MH H +GQ++    G +       LW+VPP+ AVW+P G
Sbjct: 12  VPRPIGA--MSKAYASASVVPMHRHVRGQLIYAVSGVMEVISSDYLWLVPPQRAVWMPPG 69

Query: 79  ALHAIRATGRLEGYSAFVAAGIDVGLPQRCCA----VSVTPLLRELLFRAARLPLLYDQD 134
             H +RA G +   + ++   +    P+   +    V V+ LLREL+  AA +P+ YD D
Sbjct: 70  VEHRMRARGDVSLRTLYIHPDV---FPEDFSSFPRTVQVSGLLRELILCAADIPVDYDVD 126

Query: 135 AATSRLIAVLLDEIAAARIEDLHLPMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSE 194
               RL+A+LL+EI  +  + L LP P D RL  + + ++A P +   LEGW    G S 
Sbjct: 127 GRDGRLMALLLEEIQWSPEQPLRLPSPRDQRLTRICEAILANPGDDHGLEGWGKIVGASS 186

Query: 195 RTLGRLISRETGMSFGRWRQQLGVMLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTL 254
           RTL RL   E G+SF  WRQQ  ++ A+  LA G  +  +AADLGYE+  +F +MFR+  
Sbjct: 187 RTLARLFQAELGVSFRCWRQQARILAALPRLAAGEPVTAIAADLGYETPGAFASMFRRLT 246

Query: 255 GTSPGRY 261
           G  P +Y
Sbjct: 247 GAKPSQY 253