Pairwise Alignments

Query, 781 a.a., ribonuclease R from Rhodopseudomonas palustris CGA009

Subject, 760 a.a., ribonuclease R from Caulobacter crescentus NA1000

 Score =  687 bits (1772), Expect = 0.0
 Identities = 377/723 (52%), Positives = 491/723 (67%), Gaps = 14/723 (1%)

Query: 3   KPRD-AKFPDKATLLAFIRAHPGKVGTREIAREYGLKNADRAELKRMLRELADGGSIRKS 61
           KP+  A  PD+ TLLAF+R   G+ G  +IAR +GLK ADR  L+ M+REL   G++ K 
Sbjct: 11  KPKPPAGLPDRETLLAFLR-DAGETGKADIARHFGLKGADRRALREMIRELEAQGALAKR 69

Query: 62  GRRKVSEPATLPPTLLADIVSRDADGELIATPSEWDEQDGDAPKILIHTPRRIKPGTAAG 121
           GR+  +E  +LPP  +AD+V RD DGEL     +  + D D P + +   +      A G
Sbjct: 70  GRKGFAEAGSLPPVGVADVVERDGDGELYV---KLTKSDDDVPNVRLAPGKGEAAAGAPG 126

Query: 122 VGDRALLHVEAADSREAGPAYVGRVIRVLERGKARILGIFRALPQGGGRMVPVDKKQAGR 181
           +GDR L+  E  ++ E    +  ++I+ L +   +ILG+ R   +   R+ PVD+K    
Sbjct: 127 LGDRLLVRFERLETGE----FEAKLIKKLGQSAHKILGVIRK-HRREVRVEPVDRKSK-E 180

Query: 182 ELNIAAHDAGGAQDGDLVSVDL-IRTRSFGLASGRVKERLGSLASEKAISLIAIHTHDIP 240
            L +    A   ++GDLV   +      +G   G+V E +G+    +A SLIAIH+H IP
Sbjct: 181 SLVLDPSVAHDFKEGDLVLAQVGTHGGRYGPKPGKVLEVVGTENDPRAASLIAIHSHGIP 240

Query: 241 QDFSSAAISESEAAQPATLSGREDWRELPLVTIDPPDAKDHDDAVHAAPDPDPNNKGGVI 300
             FS AA +E++ A   TL+GRED R+LP VTIDP DA+DHDDAV+A PD D  NKGG +
Sbjct: 241 TGFSEAAEAEAKTAVEPTLAGREDLRDLPFVTIDPVDARDHDDAVYAHPDEDETNKGGFV 300

Query: 301 LHVAIADVAYYVRPGSALDRDALRRGNSVYFPDRVVPMLPERISNDLCSLKPGQPRGALA 360
           + VAIADVA YVRPGSALDRDA  +GNSVYFPDRV PMLPE +SN LCSL+  + R  LA
Sbjct: 301 VWVAIADVAAYVRPGSALDRDAREKGNSVYFPDRVEPMLPETLSNGLCSLRESENRATLA 360

Query: 361 VRMVIDAQGRKRSHSFHRVLMRSAAKLSYAQAQAAIDGKPDDVTGPLLETILKPLYDAYA 420
           VRMV D  GRK+ H F R LMRSAAKLSY QAQAAIDG+PDD  GPLL+ ILKPL+DAY 
Sbjct: 361 VRMVFDKSGRKKGHRFVRGLMRSAAKLSYEQAQAAIDGQPDDKAGPLLDPILKPLWDAYR 420

Query: 421 VVKRGRDERDPLDLDLPERKIILKPDGTVDRVIVPERLDAHRLIEEFMILANVAAAEMLE 480
            +K GRD R PL ++  ER+II+K  G +  +     L+AH+LIEE M+ ANV AAE LE
Sbjct: 421 TMKIGRDARSPLAIESDERRIIIK-GGEITSITKRASLEAHKLIEEMMVQANVCAAESLE 479

Query: 481 KKALPLIYRVHDEPSVEKVHNLVDFLKTLDLSFAKGGALRPAQFNRILAMVKGEDSEPLV 540
            K  PLIYRVHD PS+EKV NL DFL+TL++ ++KG A + A+FN++L   +   +  ++
Sbjct: 480 AKRSPLIYRVHDTPSLEKVQNLADFLQTLEIRWSKGEAPQTARFNKLLEETRESPNAAII 539

Query: 541 NEVVLRSQAQAEYSSENYGHFGLNLRRYAHFTSPIRRYADLVVHRALIRALDLGDGALPP 600
           NEVVLR+Q QA YS++N GHFGLNL +YAHFTSPIRRYADL+VHR LIRAL LG   L  
Sbjct: 540 NEVVLRTQMQAHYSADNIGHFGLNLAKYAHFTSPIRRYADLIVHRGLIRALGLGTDGLTD 599

Query: 601 TETTETLAEVAAQISLTERRAMKAERETVDRLIAHHLADRIGATFQGRVSGVTKAGLFVK 660
            +  + + + A  I+  ERRAM AER+  DR IA  LADR+GATF+GR++GVT+ GLF+K
Sbjct: 600 QDIAQ-IKDTAEVITHAERRAMAAERDATDRYIAAFLADRVGATFEGRITGVTRFGLFIK 658

Query: 661 LSDTGADGLIPIRSLGDEYYNYDETRHALIGSRSGAMHRLGDVVDVKLVEAAPVAGALRF 720
           L+DTGADGL+P+ SLG E++ +D+  HAL+G R+G    LG  V+VKLVEA PV G L F
Sbjct: 659 LADTGADGLVPVSSLGQEFFVHDDKMHALVGERTGKRWPLGLSVEVKLVEATPVTGGLLF 718

Query: 721 ELI 723
           E++
Sbjct: 719 EML 721