Pairwise Alignments

Query, 788 a.a., exopolysaccharide transport family protein from Rhodopseudomonas palustris CGA009

Subject, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (344), Expect = 3e-36
 Identities = 160/669 (23%), Positives = 276/669 (41%), Gaps = 50/669 (7%)

Query: 76  IDVRLIGQALARKKHLIIAPTLLALVVSLAIVNLITPRYKSEARILIDGRENTFLRPSGD 135
           ID+R     L   K  I+  +++   ++L  V  +   Y + A ILI+  +   +  S +
Sbjct: 12  IDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAV--SIE 69

Query: 136 RDDQRSGPDPEAVTSQVQLLLSRQLALEVIKKNKLAERPEFD--PVLKGINPIKSLLA-- 191
                     E   +Q+++L S  +A EVI++  LA  PEFD  P       +K  L   
Sbjct: 70  EVYGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEW 129

Query: 192 ---LIGIGRDPFAMTPEERVLNAYYE-RLTAYA---------VDKSRVMVIEFQSEDPEL 238
              L G  ++     P+   L AY + RL  Y          + K++++ I + + DP+L
Sbjct: 130 MPFLQGFKQEETVADPD---LEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKL 186

Query: 239 AARVSNSIADGYLVLLQNARQAQAKSAGQWLSGEIESLRKKVSEAEDKVEDFRSKSSLFI 298
           AA+++N IA  Y+     A+      A  WL+  +E LR ++ E+E K++ F     L  
Sbjct: 187 AAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVD 246

Query: 299 GNNNTTLSNQQLGDINAQLANARALKSDAEAKARLIKEMLKSGGPIEA----SEVLNSEL 354
                 L+ Q+L ++ +Q+  AR  +  AE   ++     K+   + A     E+ N   
Sbjct: 247 VQGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPT 306

Query: 355 IRRLSEQRVTLRAQLAEQSSTLLGGHPRIKELKAQLSDLDQQLRDEAVKLSRSFENDARI 414
           IR L    V    +++E S      HP++K   AQL  + + LR E  +L     N+ + 
Sbjct: 307 IRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQA 366

Query: 415 ASSRVENLSASLDQLKKQASATNGQDVQLRALEREAKAQRDLLESYLAKYREATTRETID 474
           A     +L    +Q K +      ++ +   L+RE +  R+L + +LA+ +E  T  + D
Sbjct: 367 AKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKE--TSASGD 424

Query: 475 QSPSDGRIISRAIVSNTPDYPKKLPIVLIATLATLLLTSGSIATGELLRMTQPRGREVAA 534
            + +  R   +A    TP  P K  IVL+A + +           + +  T    ++V  
Sbjct: 425 FNTTIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEK 484

Query: 535 PAIVEPDLVPVAAAAPVVQPAPAAPPTFAAQPAPAPIVEPAPIETVPVAAPAAAAVGEIE 594
              +      +    PVV+         A              E +     A   +    
Sbjct: 485 QLALS-----LLGVVPVVRKQRGKLDAKAYFD-----------EKLRELTEAVRTIRTSY 528

Query: 595 ALAHRLRTAGEGGRKLTVLGTGDTDSVTTTALVLARRLAQDTKVVLIDLS-ESSAMLKAA 653
            LAH  +          + G G T    T++L LA  LAQ  K +LID      A+    
Sbjct: 529 LLAHVNQDQHVVMLTSCLPGEGKT----TSSLNLALSLAQMEKTLLIDCDLRKPAIAHRF 584

Query: 654 SIDPSAPGLAELMLGEAAFGQIITRDRSSSLQLVSAGKPGFDRM-LLHSPRLSLAIDALT 712
            I  S PG+  L+ G  +    +  D  S L +++AG    + + LL S + S  +  L 
Sbjct: 585 GISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLR 644

Query: 713 RVYDHVLLD 721
             Y  +++D
Sbjct: 645 TRYQRIVID 653