Pairwise Alignments

Query, 788 a.a., exopolysaccharide transport family protein from Rhodopseudomonas palustris CGA009

Subject, 508 a.a., lipopolysaccharide biosynthesis protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 100/453 (22%), Positives = 197/453 (43%), Gaps = 59/453 (13%)

Query: 77  DVRLIGQALARKKHLIIAPTLLALVVSLAIVNLITPRYKSEARILIDGRENTFLRPSGDR 136
           D+R     L R+  L+I  T +  V+S+ +   +  +Y++ AR+L++         S   
Sbjct: 3   DMRYYTSVLLRRSPLLIVVTGVCAVLSVLVARELPAKYEASARLLVE---------SAQI 53

Query: 137 DDQRSGPDPEAVTSQVQLLLSRQLALEVIKKNKLAERPEFDPVLKGINPIKSLLALIGIG 196
            DQ +        +Q QL + +Q  L       +A R E  P ++ ++P + + +     
Sbjct: 54  PDQLA-MSTATTGAQEQLEIIQQRLLTRANLLDIANRFEVFPDIRSMSPDEVVRS----- 107

Query: 197 RDPFAMTPEERVLNAYYERLTAYAVDKSRVMVIEFQSEDPELAARVSNSIADGYLVLLQN 256
                M    R+       LT+   D++ +M I F  + P   + V N     Y+ L+Q 
Sbjct: 108 -----MRSNTRI------NLTS-GRDRATLMTISFTDDRPVTTSDVVNE----YITLIQR 151

Query: 257 A----RQAQAKSAGQWLSGEIESLRKKVSEAEDKVEDFRSKSSLFIGNNNTTLSNQQLGD 312
                R ++A    Q+   E++ L  ++ E    +  FRS++S  +         +  G 
Sbjct: 152 EDSRLRTSRASETEQFFKQEVDRLAVQLDEKSAAIRQFRSENSDALPETFEFRLERLAGL 211

Query: 313 INAQLANARALKSDAEAKARLIKEM--LKSGGPIEASEVLNSELIRRLSEQRVTLRAQLA 370
                A  R L    E + +L + +  L++G P +A+E L+ E      E+ V LR +L 
Sbjct: 212 QERSTAFTRDLLILKEQRQQLKEALDGLRTGLPEDATEELSQE-----EEKLVDLRRELV 266

Query: 371 EQSSTLLGGHPRIKELKAQLSDLDQQLRDEAVKLSRSFENDARIASSRVENLSASLDQLK 430
           E   T     PR++ L+++++ +++ +  +++    + EN  +   +++E ++A +  L+
Sbjct: 267 EAMETAGETAPRVRILQSRIAQVERVI--QSLGGITAIENPTQTLQAQIEQINAQIGFLE 324

Query: 431 KQASATNGQ--------------DVQLRALEREAKAQRDLLESYLAKYREATTRETIDQS 476
           +Q   T  Q               V L +L+R+ +  ++   S + +   A T E I+ +
Sbjct: 325 EQLGTTQSQIEDVEATLDLTPGISVSLESLQRDYQNVQEQYNSAVERLAIAQTSERIELA 384

Query: 477 PSDGRIISRAIVSNTPDYPKKLPIVLIATLATL 509
               RII     + TP  P  +P +L+A   T+
Sbjct: 385 SRGQRIIVLEQAA-TPTDPSSMPPLLVAAGGTI 416