Pairwise Alignments

Query, 401 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 273 a.a., amino-acid transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 150 WYLAVLGSLPSPRQSVSVMDSFFLSNRGIVVPRLAGEAGLDGF--LVALLIAVAAAIVLP 207
           W+L  L  + +   +V   +  F     +V+  L    G+  F  LV  ++A    + + 
Sbjct: 17  WWLIALLVIAAALAAVIAANDIFTQVFTVVLKGL----GVTVFVTLVGFVLATVLGLGVA 72

Query: 208 LYARRRLFATGKPMRVWPWVL-GLLIGLPLIAFVIVGKPFSLEVPVLRGFNFVGGSRIAP 266
           L A        +  R +  V+ G+ I + L     VG P  + V        +    I P
Sbjct: 73  LMALSEHVVLRQIARFYTEVIRGVPILVLLFYIAFVGAPALVTVANFVAAPLISAGWIEP 132

Query: 267 EFVA-------LTLALSTYTAAFIAEVVRAGILSVHKGQMEAGASLGLSRGQTLRLIVIP 319
             V          +AL    +AFIAEV RAGI SV KGQ+EA  +LGLSR Q  RL+V P
Sbjct: 133 FVVRDVSLMWRAIMALMIGYSAFIAEVFRAGIQSVDKGQVEAAKALGLSRYQRFRLVVFP 192

Query: 320 QAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLL 379
           QA+RVILPPL N ++ + K+SSL   +G  D+ +       S + +  E  +I   VYL+
Sbjct: 193 QAIRVILPPLGNDFVAMVKDSSLVSVLGVADI-TQMGKVYASGSFRFFETYSIVAYVYLV 251

Query: 380 ISLVTSALMSLYGWRINRS 398
           +++  S  +     R+ RS
Sbjct: 252 LTIGLSLALRAVERRLRRS 270



 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 84  SDSYTRVFLV---GLINTLVVSVVGIFFATVIGFAVALARLSPNWLISRIGGGYVEIVRN 140
           +D +T+VF V   GL  T+ V++VG   ATV+G  VAL  LS + ++ +I   Y E++R 
Sbjct: 36  NDIFTQVFTVVLKGLGVTVFVTLVGFVLATVLGLGVALMALSEHVVLRQIARFYTEVIRG 95

Query: 141 LPLLFQILFWYLAVLGS 157
           +P+L  +L +Y+A +G+
Sbjct: 96  VPIL--VLLFYIAFVGA 110