Pairwise Alignments

Query, 401 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 387 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  273 bits (697), Expect = 8e-78
 Identities = 162/387 (41%), Positives = 233/387 (60%), Gaps = 12/387 (3%)

Query: 18  RALGGRSGW-------KGLLAQVLFVAALFWIGYEIVDNARDNLANQRIASGFAFMSHTA 70
           RALG +  W       +  L+Q+  +  +F +   +  N  DNL    I  GF ++ H A
Sbjct: 2   RALGRKITWILAAWWGERPLSQLAVLLGVFALFSVLGANTVDNLGRLGITVGFGYLDHPA 61

Query: 71  GFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGIFFATVIGFAVALARLSPNWLISRI 130
            F + ++L+ Y   DSY R   VG++NT +VS++G   AT++G A+ + RLS N LISR 
Sbjct: 62  NFEIGESLVAYTSGDSYARALGVGILNTALVSIIGCLLATLLGVALGIGRLSANLLISRA 121

Query: 131 GGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSVSVMDSFFLSNRGIVVPRLAGEAGLD 190
              YVE++RN PLL Q+ FW  A + +LP PRQ+   +   FL+NRG+ +P LA +    
Sbjct: 122 VQLYVEVIRNTPLLLQLFFWS-ATIHALPGPRQAFEPLTGVFLTNRGLYMPALAMDGAAV 180

Query: 191 GFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPWVLGLLIGLPL-IAFVIVGKPFSLE 249
             L+ L     A +V  L   RR     +  +    +LG +  L L +  + +G   S+E
Sbjct: 181 FSLLLLGGGALAGVVRILVHERRHGPMERAAKTA--LLGAVAVLLLGVLALCLGGAVSVE 238

Query: 250 VPVLRGFNFVGGSRIAPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQMEAGASLGLSR 309
            P L GFN  GG  ++PEF+AL + L    +A I E+VR+GI +V +GQ EA  SLGL+R
Sbjct: 239 PPRLGGFNITGGWVLSPEFLALLVGLVINASAVICEIVRSGIEAVPEGQWEAARSLGLTR 298

Query: 310 GQTLRLIVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEV 369
           G+TLRL+V+PQA+RV++P +T+ YL+LTKNSSLAVAIG+PDL SV   T+ +QTG   E 
Sbjct: 299 GRTLRLVVLPQALRVVIPLMTSSYLSLTKNSSLAVAIGFPDLVSV-VNTSANQTGHVFEA 357

Query: 370 IAITMGVYLLISLVTSALMSLYGWRIN 396
           IA+ M VYL ISL  SA ++ Y  R++
Sbjct: 358 IALMMAVYLTISLTVSAALNFYNHRLS 384