Pairwise Alignments

Query, 641 a.a., sigma 54-interacting transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (660), Expect = 4e-73
 Identities = 137/266 (51%), Positives = 183/266 (68%), Gaps = 12/266 (4%)

Query: 302 QLENDYLQEEIRIET--------NPRGIIGQSEAIQTTLRQVKLVAPTAATVLITGESGT 353
           +LEN   Q ++R+E         +   IIG S  +      + +VAP+   +LI GE+G 
Sbjct: 167 ELENQAKQTQLRLEELNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGV 226

Query: 354 GKELIARAIHEASTRRDRPLIRVNCAAIPRELFESEFFGHARGAFTGAVRDRIGRFELAD 413
           GKEL+AR IH+ S R+ +PL+ VNCAAIP  L ESE FGH +GAFTGA R R+G+F LAD
Sbjct: 227 GKELVARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALAD 286

Query: 414 GGTLFLDEVGEIPLELQSKLLRVLQEGNFERVGEERTRNVDVRLIAATNRDLKREVQRGH 473
           GGTLFLDE+GE+PL  QSK+LR LQ    + VG++R + VDVR++AATNRDLK+EV+ G 
Sbjct: 287 GGTLFLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGR 346

Query: 474 FREDLYFRLSVFPIESVPLRDRREDIPLLAQHFLTNEARELK-TELRLSQGDVRRLMRYD 532
           FR DLY RLSV+PI   PLR+R+ D+ LLA +F+    R+L  T+L+L    + +L++Y 
Sbjct: 347 FRADLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYP 406

Query: 533 WPGNVRELQNVIERATILA---QNGR 555
           WPGNVREL++VI RA + A   Q GR
Sbjct: 407 WPGNVRELEHVINRAALKAKARQRGR 432