Pairwise Alignments

Query, 194 a.a., TRAP transporter small permease from Rhodopseudomonas palustris CGA009

Subject, 170 a.a., TRAP transporter, subunit DctQ from Phaeobacter inhibens DSM 17395

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 23  LLIFIAVMHRYLVGIPFLYPILFPIDLSWAQELCIYMFVWMAKFGAAYGVRTGIHVGVDV 82
           LL+   VM    + +  +   LF     W +E+  Y F+++A  GAA  V+   H+ +DV
Sbjct: 15  LLLTFYVMLVITMAVEVIRRELFAYSSIWGEEIVRYSFIYLAWIGAAAAVKERAHIRIDV 74

Query: 83  LVNVMRPNLRKVTILFG-------LFCGAFFTFIIGTMGAKFVYGLINTNQTSPDLEIPS 135
           L++ + P  + +  +FG            +++F    + AKF          S  L I  
Sbjct: 75  LMHYLGPRPKALLYIFGDLVMFVVALVALYWSFETVLVSAKF-------GSVSHGLRISM 127

Query: 136 WIVYLCIPLGSYLMCFRFLQ 155
               + +P G  LM +R LQ
Sbjct: 128 VWFLMAVPAGFALMVWRLLQ 147