Pairwise Alignments

Query, 1040 a.a., CusA/CzcA family heavy metal efflux RND transporter from Rhodopseudomonas palustris CGA009

Subject, 1080 a.a., AcrB-family cation/multidrug efflux pump from Caulobacter crescentus NA1000

 Score =  623 bits (1607), Expect = 0.0
 Identities = 384/1077 (35%), Positives = 600/1077 (55%), Gaps = 55/1077 (5%)

Query: 1    MGRLVELAVNRRFLMLALFLLVLAGGVAAFEHLNIEAYPDPTPPMVDIVTQSPGLSAEEI 60
            +GR+++L+V  R+ ++A+  LV A GV     L I+A PD T   V I T  P L+  E+
Sbjct: 2    IGRILDLSVRARWAVIAVVALVAALGVYNLIRLPIDAVPDITNKQVQINTVVPALAPAEV 61

Query: 61   ERYITIPIETQVAGIKNLKTIRTISLYGLSDVKLQFSFDYTYQQALQQVLNRLSQL-PPL 119
            E+ +T P+ET ++GI  L++ R+IS  G S V + F        A QQV  RL+ +   L
Sbjct: 62   EKLVTFPVETAMSGIPGLESTRSISRNGFSQVTIVFQEKTDLYFARQQVSERLTSVGKAL 121

Query: 120  PGNVQPGISPLSP-IGEIFRYRLV-------------GPPGYS----------------- 148
            P   QP + P+S  +GE+  + +              G PG+                  
Sbjct: 122  PEGAQPAMGPISSGLGEVLMWTVAYDHPGGRGARVKDGAPGWQSDGAYLTITGERLTDTT 181

Query: 149  --VLDLKTLQDWVLQRRFRAIPGVIDVTGWGGKTKTYEVQVDFNKLIAYGLTLPQVLQAV 206
                 L+ +QDW+++ + R + GV  V   GG  K + VQ D  ++ +YG++  Q+ +A+
Sbjct: 182  AQAAYLREVQDWIVRPQMRGVAGVAGVDSIGGYEKQFAVQPDPARMASYGVSFSQLAKAL 241

Query: 207  SNSNINVGGNTVDIGAQSAVVRGVGLIRSLDDLANTMVVSNNGNPVLVKDVAKVSVAEKP 266
              +NI VG N ++ G ++ +VR    +R++D++AN  V +  G P+ V+D+A + V    
Sbjct: 242  EAANIAVGANFMERGGEAYLVRADARVRNIDEIANATVATRAGMPIRVRDLATLKVGGGL 301

Query: 267  RLGIAGINNDDDIVQGIVLMRRGEQSSPTIARVEQAVTKINASGVLPPGVRIERIYDRKD 326
            R G A   N +++V G VLM  GE S        + +  I  +  LPPGVR++  YDR  
Sbjct: 302  RTGAAS-ENGEEVVVGTVLMLTGENSRAVAGASAERLKAI--AKTLPPGVRVQITYDRSK 358

Query: 327  LIDTTTHTVLHNMVVGILLIVLLQWIFLGDLRSALIVGATIPFALFFAVIILVLRGESAN 386
            L++ T  TV  N+V G LL++ + ++ LG+ R+ALI    IP ++    I +   G S N
Sbjct: 359  LVNATIKTVEKNLVEGALLVIAVLFVLLGNFRAALITALVIPLSMLMTAIGMNRLGVSGN 418

Query: 387  LLSVGAIDFGLIVDATVIMVEAIFRRLSHTTVLSPEERSQISADTIMGMKKHAIRSAAAD 446
            L+S+GA+DFGLIVD  VI+VE   RRL+       E + Q         + H  R AA +
Sbjct: 419  LMSLGALDFGLIVDGAVIIVENSLRRLA-------ERQHQEGRLLTSSERLHETREAARE 471

Query: 447  VSRSIFFAAAIIIAAFLPLFTLSGVEGNIFGPMARTYAYALAGGLLATFTVTPALSAIIL 506
            +     +  AII+  + PL T +GVEG  F PMA T   ALA   + + T  PA+ A+++
Sbjct: 472  MIAPTVYGQAIILLVYAPLLTFTGVEGKTFSPMAITVMLALAAAFVLSLTFIPAMVALLI 531

Query: 507  PHHVQETETWLMRMLHKVYTPWLGWAVKNRPVVMAGAAGLVLTTVIATRFLGLEFLPKLE 566
               V E E  L+R     Y P L  AV     V+A A GL +  +I   FLG EF P+L+
Sbjct: 532  RGKVAEKEVALVRWAKVGYAPLLRKAVARPWPVIAAATGLFVVAMITFTFLGREFTPQLD 591

Query: 567  EGNLWIRATLPPTISLTEGNGYVNDMRKLIAGFPEVESVVSQHGRPDDGTDAAGFFNAEF 626
            E +L ++A   P+ SL +       + + IA FPEVE V S+ G  +  +D      ++ 
Sbjct: 592  EKDLAVQALRIPSTSLEQSLRMQRQIERTIAAFPEVEFVYSKTGTAEVASDPMPPNASDS 651

Query: 627  FAPLKPASQWPGS-HDKDELTARMLKQLQAKFPGVEFNFSQYLQDNVSEAVSGVKGENSI 685
            F  LK   +WP S   K +L  RM ++L+    G  + FSQ +Q   +E ++GV+G+ +I
Sbjct: 652  FIILKAQDEWPDSKQSKAQLVDRMERKLEG-LTGNVYEFSQPIQMRFNELIAGVRGDVAI 710

Query: 686  KLYGNDLQALTDTANKIKAVLSTVQGVQDLAVFTSLGQPTIQIDVNRARAARYGLTPGDI 745
            K+YG+DL A+T +A++I  VL  V+G  D+ V  + G PT+ + ++R    R GLT  ++
Sbjct: 711  KVYGDDLAAMTASADQIAGVLRGVRGAADVKVEQTSGFPTLDVSLDRDAIGRLGLTVEEV 770

Query: 746  NATIKVAIGGDSAGDLYEPGSDRHFPIIVRLAPEYRKSAEAIHNLRIGVQGPNGIT---- 801
              T+ VA+GG ++G +++   DR F ++VRL    R   +AI  L + +  P+G +    
Sbjct: 771  ADTLAVAMGGRASGLVFQ--GDRRFEVVVRLPEATRNDLDAIGALPVML--PHGASAGPR 826

Query: 802  -QIPLSELADIQLVSGAAYIYREDQERYLPIKFSVRERDLGSAIREAQEKVNAQVQLPPG 860
              +PL ++A      G   + RE+ +R + ++ +VR  DLGS + EAQ KV+AQ++LP G
Sbjct: 827  LSVPLRDVARFSFSEGLNQVSRENGKRRVVVQANVRGNDLGSFVSEAQAKVSAQIELPAG 886

Query: 861  SRMEWVGEFGNLQDAIKRLSIVVPISLALIGALLFFNFGSLTDTLLAMSVIPMAIFGGVM 920
            S +EW G+F NL+ A  RLS+VVP+   LI ALL+   G     L   S IP+A+ GGV 
Sbjct: 887  SWVEWSGQFENLKAAQSRLSLVVPLCFLLIFALLYMALGGFAPALAVFSAIPLALAGGVF 946

Query: 921  GLLVSGIPFSVSAAIGFIALFGIAVMDGIIILSQYNQLIDQGLDRLRAVVRTGELQLRPV 980
            GL + GIPFSVSAA+GFIAL G+AV++G+++++   Q + QGL   +A++     +LRPV
Sbjct: 947  GLALRGIPFSVSAAVGFIALSGVAVLNGLVMMTAIRQRLAQGLALEQAIIAGAMERLRPV 1006

Query: 981  LMTCVIAGVGLLPAAMSTGIGSQVQKPLAIVVVTGMMLAPGVILITLPVLISYFSRR 1037
            +MT ++A +G +P A++T  G++VQ+PLA VV+ G++ A  + L  LP +  +  R+
Sbjct: 1007 MMTGLVASLGFVPMALATETGAEVQRPLATVVIGGLITATALTLFVLPAICRFVLRQ 1063