Pairwise Alignments

Query, 394 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 404 a.a., amide-urea binding protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  129 bits (325), Expect = 1e-34
 Identities = 98/348 (28%), Positives = 164/348 (47%), Gaps = 10/348 (2%)

Query: 45  GKGVLGRQIRHKVSDTEGKPNLDVQSATQFIQRDKAIMVSGSVSSSSAIALEELGSREKV 104
           G  + G +I    +D + K ++    A Q+I       +    +SS+ +A++E+G  +K 
Sbjct: 63  GGEIDGAKIEFVSADHQNKADIAANVANQWIDTGGVDAIVDIPNSSAMLAVQEIGRTKKR 122

Query: 105 LYMVGIAGSNDITGKNCQRYGFRSQQNAYMAAKGLAPVVAKALGKNIKMAFLVPDYTYGH 164
           + +    GS D TG  C  YGF    + Y  AKG A  + K  G       +V DY +GH
Sbjct: 123 IVIASGGGSTDFTGPKCSPYGFHWTYDTYSLAKGTAESLVKDGGTT--WYNIVVDYAFGH 180

Query: 165 SVYDSFSKFATEQGWKQVAKEVVPLGTTDYSSALLNIANSGADVFVNIAFGADSVASTKQ 224
           S+    S+F T+ G + V + + PLGT+D+SS LL    SGA V   ++ GAD+V + KQ
Sbjct: 181 SLDTDTSRFITQAGGQVVGRVLHPLGTSDFSSYLLQAQGSGAKVIGVLSAGADTVNAIKQ 240

Query: 225 AEQFGVLKRMKLVVPNLSSFQD-KELGAELMQGVYGSCDFWFGLQDKFPLAKAFVDSFVA 283
           A +FG+ +  +++   L   Q    LG E  QG+  +  F++   D+    +A+   F+ 
Sbjct: 241 AAEFGITQGGQILAGLLIFDQTVHSLGLETAQGLRLTTGFYW---DRTDATRAWSAEFLK 297

Query: 284 QNNYHPRWGAHIG-YMQTYLWAMSVERANTFNPVDVIKVMENSKAQPYVTTIGNVYFRAE 342
           ++  +    AH G Y     +  +++ A T N   V   M  +         G V     
Sbjct: 298 RSTKNIPSMAHAGVYSGVRHYLAAIKAAGTDNADAVAAKMRETPVNDMFAENGTV---RA 354

Query: 343 DHQMVRPIPILRGKKPSEMKHKEDFYDIIDLVDGEAVMNPPDLFGCKL 390
           D +MV  + ++  KKP++   + D   ++ ++ GE    P    GC L
Sbjct: 355 DGRMVHDMYLMEVKKPADSTSEWDLMRLVHVIPGEEAYRPLAEGGCPL 402