Pairwise Alignments

Query, 485 a.a., form I ribulose bisphosphate carboxylase large subunit from Rhodopseudomonas palustris CGA009

Subject, 466 a.a., Ribulose-bisphosphate carboxylase, form II (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (384), Expect = 2e-41
 Identities = 133/426 (31%), Positives = 193/426 (45%), Gaps = 35/426 (8%)

Query: 20  YKKMGYWEPDYEPKDTDVIALFRVTPQDGVDPIEAAAAVAGESSTATWT-VVWTDRLTAA 78
           Y  +   E D       V+  + + P+ G   +  AA  A ESST T   V  TD  T  
Sbjct: 7   YVNLALKEEDLIAGGEHVLCAYIMKPKAGYGYVATAAHFAAESSTGTNVEVCTTDDFTRG 66

Query: 79  EKYRAKCYRVDPVPNSLGQYFAYIAYDLDLFE------PGSISNLTASIIGNVFGFKPLK 132
               A  Y VD       +    IAY + LF+         I++     +GN  G   ++
Sbjct: 67  VD--ALVYEVDEA-----RELTKIAYPVALFDRNITDGKAMIASFLTLTMGNNQGMGDVE 119

Query: 133 ALRLEDMRLPIAYVKTFQGPATGI-----VVERERMDKFGRPLLGATVKPKLGLSGRNYG 187
             ++ D  +P AY   F GP+  I     V+ R  +D  G  ++G  +KPKLGL  + + 
Sbjct: 120 YAKMHDFYVPEAYRALFDGPSVNISALWKVLGRPEVD--GGLVVGTIIKPKLGLRPKPFA 177

Query: 188 RVVYEALKGGLDFTKDDENINSQPFMHWRERFQYCMEAVNKAQAQTGEIKGTYLNVTAAT 247
              +    GG DF K+DE   +QPF   R+      +A+ +AQ +TGE K    N+TA  
Sbjct: 178 EACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMRRAQDETGEAKLFSANITADD 236

Query: 248 MEDMYERAEYAKE-LGSIIVMIDLVI-GYTAIQSMAKWARKN--DMILHLHRAGHSTYTR 303
             ++  R EY  E  G     + L++ GY A  +    AR+   D  LH HRAGH   T 
Sbjct: 237 PFEIIARGEYVLETFGENASHVALLVDGYVAGAAAITTARRRFPDNFLHYHRAGHGAVTS 296

Query: 304 -QRNHGVSFRVIAKWMRLAGVDHIHAGTV-VGKLEGDPATTKGYYDICREDFNPMTLENG 361
            Q   G +  V  K  RL G   IH GT+  GK+EG+ +     Y + +++        G
Sbjct: 297 PQSKRGYTAFVHCKMARLQGASGIHTGTMGFGKMEGESSDRAIAYMLTQDE------AQG 350

Query: 362 LFFDQHWASLNKLMPVASGGIHAGQMHQLLHLLGE-DVVLQFGGGTIGHPMGIAAGATAN 420
            F+ Q W  +    P+ SGG++A +M      LG  +V+L  GGG  GH  G  AGA + 
Sbjct: 351 PFYRQSWGGMKACTPIISGGMNALRMPGFFENLGNANVILTAGGGAFGHIDGPVAGARSL 410

Query: 421 RVALEA 426
           R A +A
Sbjct: 411 RQAWQA 416