Pairwise Alignments

Query, 517 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score =  162 bits (409), Expect = 3e-44
 Identities = 129/496 (26%), Positives = 220/496 (44%), Gaps = 15/496 (3%)

Query: 20  LGGAAATGVLGLPRQALAAKTGGILKVAAPANPSSLDPATGGAGSDHSILWTIYDTLVEW 79
           +G AA    L L   A  A+  GIL +    + ++ DP       D+ +   ++D LV  
Sbjct: 8   IGRAAFAAALML--SAGYAEAAGILSIGRREDSTTFDPIKSAQNVDNWVFSNVFDVLVRV 65

Query: 80  DYDTLKPKPGLAK-WSYPDPNTMVLDISEGIKFHDGTSLDAEAVKFNLDRNRSDQRSNVK 138
           D    K +PGLA+ W+  D            KF DG+ + AE   F+L R R  + S   
Sbjct: 66  DKTGTKLEPGLAESWTLSDDGLTYTFKIRDAKFSDGSPITAEDAAFSLLRIRDHEGSLWS 125

Query: 139 PDLSSVDSVEVTGPLQVTLKLKNPDTALPAILSDRAGMMVSPTNIKALGNDT--DRKPVG 196
                +++ E   P  + +KLK P     + L+     ++S   ++A G D   +     
Sbjct: 126 DSYKIIETAEAADPKTLVVKLKTPSAPFLSTLALPNVSVLSKKAVEA-GEDAFAELPTAS 184

Query: 197 AGPWKFVRWNDNEIVVVARNENYWRKGRPFLDGIEFNIIPENATALRSVVAGQNDMAFQL 256
           +G +    W   + V++ +N N+W+  R  LDG+E+  +P++ T + +V AGQ D A  +
Sbjct: 185 SGAFTVKEWRRGDRVILEKNPNFWQADRVKLDGVEWISVPDDNTRMLNVQAGQLDTAIFV 244

Query: 257 PARLKPVIERAKDLKLVSSPTLYCIQVYFNYARAPLDNIKVRQAINFALDRDTFVKAALS 316
           P      +++  +L +    +     +  N+    L   +VRQA++ A+D+   V     
Sbjct: 245 PFSRVEELKKDPNLTVHIDTSTREDHLLINHEHGMLAKKEVRQALDMAIDKKAIVDTVTF 304

Query: 317 GLGEPARMTLPSSHWAYAKDVAGTYPYDPEKAKKLLAEAGYKD-GLEMTIGGYTDQDSVR 375
           G+G  A   +P     Y  D    YPYDPEKAK +LAEAG  D  L   +    + D  +
Sbjct: 305 GIGTVANSYIPKGS-LYHYDANYQYPYDPEKAKAMLAEAGASDLTLNYVVNAGNEVDE-Q 362

Query: 376 RGEVIQDQLGKVGIKLKFTRGTIAEISAQFFAQEKKFDMLVSAWTG---RPDPSMTYGLG 432
              ++Q Q  K G+ +   +   ++      A +  +D+ V  WT     PD   T+ LG
Sbjct: 363 IAVLLQQQFAKAGVTVNLQKVDASQSWDMLVAGD--YDISVMYWTNDVLDPDQKTTFVLG 420

Query: 433 FDKGAYYNAGRTADPELSKLIQESRASQDLNERAAVFAKIQRFTVEQALSAPLAFQYELD 492
            D    Y   R    ++ +L+  +R   D  +R A++  IQ+   +      L +   L+
Sbjct: 421 HDTNMNYMT-RYNSEKVKELVAAARLELDPAKREAMYVDIQKTAKDDVHWIDLYYSPYLN 479

Query: 493 ALSAKVKDFQPNLLGK 508
                +++F  N LG+
Sbjct: 480 VSRKNIENFYQNPLGR 495