Pairwise Alignments

Query, 1182 a.a., urea carboxylase from Rhodopseudomonas palustris CGA009

Subject, 654 a.a., Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA1: biotin carboxylase + biotin carboxyl carrier protein (BCCP) from Mycobacterium tuberculosis H37Rv

 Score =  400 bits (1029), Expect = e-115
 Identities = 222/463 (47%), Positives = 295/463 (63%), Gaps = 8/463 (1%)

Query: 1   MFSKVLIANRGEIAGRIGRTLRRMGIASVAIYSDADRFTRPMREADEAVRVGGDAASDSY 60
           MF  VL+ANRGEIA R+ RTLRR+GI SVA+YSD D   R + EAD AVR+G   A +SY
Sbjct: 1   MFDTVLVANRGEIAVRVIRTLRRLGIRSVAVYSDPDVDARHVLEADAAVRLGPAPARESY 60

Query: 61  LNVDAVIDACLLTGAQAVHPGYGFLSENRGFAERLKQHGIAFIGPRPEHLEAFGLKHRAR 120
           L++  V+DA   TGAQA+HPGYGFL+EN  FA   ++  + F+GP    +E  G K  A+
Sbjct: 61  LDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACERARVVFLGPPARAIEVMGDKIAAK 120

Query: 121 ELAQGSNVPLLPGTGLIDSIDEAL-EAAARIGFPLMLKSTAGGGGIGMQLCHDEATLRER 179
                 +VP++PG       D+AL  AAA +G+P+++K +AGGGG GM+L  D A L E 
Sbjct: 121 NAVAAFDVPVVPGVARAGLTDDALVTAAAEVGYPVLIKPSAGGGGKGMRLVQDPARLPEA 180

Query: 180 FATVQRTARASFGDARVYLERFVADARHIEVQIFGDGQGNVIALGERDCSLQRRNQKVVE 239
             + +R A +SFGD  ++LERFV   RHIEVQ+  D  GNV+ LGER+CSLQRR+QKV+E
Sbjct: 181 LVSARREAMSSFGDDTLFLERFVLRPRHIEVQVLADAHGNVVHLGERECSLQRRHQKVIE 240

Query: 240 ETPAPGISDEMRARLHQAAVALGQSVAYESAGTVEFIYDVAR-DEFYFLEVNTRLQVEHP 298
           E P+P +  + R R+  AA    + V Y  AGTVEFI    R DEF+F+E+NTRLQVEHP
Sbjct: 241 EAPSPLLDPQTRERIGVAACNTARCVDYVGAGTVEFIVSAQRPDEFFFMEMNTRLQVEHP 300

Query: 299 VTEAVFGVDLVEWMVRQAAGDSPLATYTPRPPKGAAIEVRLYAENPGAGFRPSAGRLTRV 358
           VTEA+ G+DLVEW +R  AG+           +G AIE R+YAE+P   F P+ GR+  V
Sbjct: 301 VTEAITGLDLVEWQLRVGAGEKLGFAQNDIELRGHAIEARVYAEDPAREFLPTGGRVLAV 360

Query: 359 DFP--DDVRVDGWIETGDEVTPFYDPMLAKLIVHAADRDAAIDQIIGALAATTVAGIETN 416
             P    VRVD  +  G  V   YDP+L K+I H ADR+ A+D++  ALA T V G++TN
Sbjct: 361 FEPAGPGVRVDSSLLGGTVVGSDYDPLLTKVIAHGADREEALDRLDQALARTAVLGVQTN 420

Query: 417 LDYLRAIASSALFHSGKVATKVL----ADFSFAARTIDVVAPG 455
           +++LR + +      G + T VL    ADF+      DV+A G
Sbjct: 421 VEFLRFLLADERVRVGDLDTAVLDERSADFTARPAPDDVLAAG 463



 Score = 36.6 bits (83), Expect = 7e-06
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 1119 PGNVWKLTVEPGEHVEIGQTLAVIESMKMEIAIPATARGIVRAL 1162
            PG+V  + VE G  +  G  + V+E+MKME ++ A   G V+ L
Sbjct: 593  PGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPVSGRVQVL 636