Pairwise Alignments

Query, 1182 a.a., urea carboxylase from Rhodopseudomonas palustris CGA009

Subject, 664 a.a., methylcrotonyl-CoA carboxylase, alpha subunit from Marinobacter adhaerens HP15

 Score =  389 bits (1000), Expect = e-112
 Identities = 206/445 (46%), Positives = 291/445 (65%), Gaps = 5/445 (1%)

Query: 1   MFSKVLIANRGEIAGRIGRTLRRMGIASVAIYSDADRFTRPMREADEAVRVGGDAASDSY 60
           MFSK+LIANRGEIA RI +T  RMGI  VA+YS+AD   R +  ADEA  +G   +S+SY
Sbjct: 1   MFSKILIANRGEIACRIIQTAHRMGIRVVAVYSEADANARHVAMADEAFHIGPAPSSESY 60

Query: 61  LNVDAVIDACLLTGAQAVHPGYGFLSENRGFAERLKQHGIAFIGPRPEHLEAFGLKHRAR 120
           L  + +I+    +GAQA+HPGYGFLSEN GFAE  + + I FIGP    + A G K  A+
Sbjct: 61  LRAEKIIEIAKKSGAQAIHPGYGFLSENTGFAESCEANNIVFIGPPSSAIAAMGSKSAAK 120

Query: 121 ELAQGSNVPLLPGTGLIDSIDEALEAAA-RIGFPLMLKSTAGGGGIGMQLCHDEATLRER 179
            + + + VPL+PG    D   E L A A + GFPL+LK+ AGGGG GM++ ++     + 
Sbjct: 121 AIMEKAGVPLVPGYHGDDQSVETLRAEAEKCGFPLLLKAVAGGGGKGMRVVNNMGEFDDA 180

Query: 180 FATVQRTARASFGDARVYLERFVADARHIEVQIFGDGQGNVIALGERDCSLQRRNQKVVE 239
            A  +R A+ +FG+  + +ER++   RH+E+Q+F D +G  + L ERDCS+QRR+QKV+E
Sbjct: 181 LAAAKREAQNAFGNPDMLIERYLTQPRHVEIQVFCDQEGKGVYLAERDCSVQRRHQKVLE 240

Query: 240 ETPAPGISDEMRARLHQAAVALGQSVAYESAGTVEFIYDVARDEFYFLEVNTRLQVEHPV 299
           E PAPG+S+E R  + +AAV   Q++ Y  AGTVEF+YDV    F+F+E+NTRLQVEHPV
Sbjct: 241 EAPAPGLSEETRKAMGEAAVRAAQAINYVGAGTVEFLYDV-DGSFFFMEMNTRLQVEHPV 299

Query: 300 TEAVFGVDLVEWMVRQAAGDSPLATYTPRPPKGAAIEVRLYAENPGAGFRPSAGRLTRVD 359
           TE V G DLVEW ++ A GD+     +    +G A+E R+YAE+P   F P+ G L  + 
Sbjct: 300 TEMVTGQDLVEWQLKVAWGDALPLEQSQVKTRGHALEARIYAEDPDQDFLPATGNLRYLS 359

Query: 360 FPDD---VRVDGWIETGDEVTPFYDPMLAKLIVHAADRDAAIDQIIGALAATTVAGIETN 416
            PD+   VRVD  +  GD+++  YDPM+AKLIV    RD AI++++ AL    +AG++TN
Sbjct: 360 TPDESAHVRVDTGVTEGDDISIHYDPMIAKLIVWDETRDQAINRMVQALEHYRIAGVKTN 419

Query: 417 LDYLRAIASSALFHSGKVATKVLAD 441
           + +L A+A +  F   ++ T  + D
Sbjct: 420 IRFLHALADAQPFREAELTTGFIDD 444



 Score = 38.9 bits (89), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 1120 GNVWKLTVEPGEHVEIGQTLAVIESMKMEIAIPATARGIVRALNAKPGQTLRAGDLICAL 1179
            G +  +  + G+ V  GQ+L ++E+MKME AI A A G+V  +    G  +  G  + A+
Sbjct: 597  GAIVAVQAKVGDKVTAGQSLVIMEAMKMEHAIKAPADGVVTEIFFAEGDQVSEGAELIAI 656

Query: 1180 E 1180
            E
Sbjct: 657  E 657