Pairwise Alignments

Query, 340 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 347 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 11/283 (3%)

Query: 62  LQVQPGLNLLSTDLRLTRPAVVEAETFPSVCLSVVL--DGYAQGKTAGIDTGFRPGEFWI 119
           L ++PGL L   + +       + E  P++ L ++   +GY+    +     F+P    +
Sbjct: 49  LPLRPGLLLSMREGQALTDLRGKREVGPAMHLEILFAAEGYSVVSGSTERYPFKPNTVSL 108

Query: 120 SSTNDRVSTRKVILSAHPVRTVELVVTPQWFEFAQTRFGGDPAFDAMGA---AVERATVT 176
             T+  V     I +   +R++ +  +  + +   ++ GG  A  + G     + R    
Sbjct: 109 QVTSSAVVAEFFIPAGAVIRSLAVRFSGLYLDHLASK-GGFAALCSGGGDPLLLSRGVDL 167

Query: 177 RRRPLDARLKQVARSIQHSTGSGFATALYLESRALDLLAALAAEFQGGGERPAVDLKAPA 236
             RPL   L+ +A  I  + G+     L+LE++ L+L++ + +    GG +   +    A
Sbjct: 168 VMRPLSPALRPLASQILATEGATDGERLFLEAKILELISVVLSTPASGGGQSQTEPTKTA 227

Query: 237 LER-----VVAVREQIDRDPAVATTITALAAAFAVSPSKLKQDFSAAFGVGLGRYIHERR 291
           L R     +   RE +  D      I  LA    ++ +KLK  F   +   +  Y+ + R
Sbjct: 228 LSRRDHKKIGQARELLIGDLDKTWKIKDLARHVGMNENKLKAGFRQIYDNSIYAYLQDWR 287

Query: 292 LQFGRELVEDHGVTVSEAAYRCGYGQPANFTTAFKRRFGRPPS 334
           ++     ++    +V+  A   GY  PA+F   F+R FG  PS
Sbjct: 288 MRAASHRLKQGEDSVTGVALSVGYSNPAHFAKVFRRYFGVSPS 330