Pairwise Alignments

Query, 340 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 295 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 15/265 (5%)

Query: 77  LTRPAVVEAETF---PSVCLSVVLDGYAQGKTAGIDTGFRPGEFWISSTNDRVSTRKVIL 133
           ++ P+  EA  +   P +  S +  G       G      PG    S   +    R  + 
Sbjct: 39  MSLPSAFEATAYNDRPFIHFSCLFQGMVDVTFGGGAFRLEPGALLTSYAPEE---RFHLS 95

Query: 134 SAHPVRTVELVVTPQWFEFAQTRFGGDPAFDAMGAAVERATVTRRRPLDARLKQVARSIQ 193
            + P RT+EL+VTP+            P +D +G  + R      +  D R++  A  + 
Sbjct: 96  FSGPYRTIELMVTPETLAAL-----AGPQYDRIGDDIHRGFCVHHKANDRRVRDAAARLA 150

Query: 194 HSTGSGFATALYLESRALDLLAALAAEFQGGGERPAVDLKAPALERVVAVREQIDRDPAV 253
                G A  L + +  L+ LA   A ++   +  AV L+   L  ++A RE++ +D + 
Sbjct: 151 WLMDEGQAPPLLIHAATLEFLAWHLASYRSAEDGEAVPLRERKL--LLAARERLLQDLSA 208

Query: 254 ATTITALAAAFAVSPSKLKQDFSAAFGVGLGRYIHERRLQFGRELVEDHGVTVSEAAYRC 313
             TI  LA    ++  KLK+ F   FG  +       R+   R L++ HGVT  E A   
Sbjct: 209 PPTIAELARETGLNQLKLKRGFKTVFGHSVYGLFQRERMDRARLLLQHHGVT--ETAMML 266

Query: 314 GYGQPANFTTAFKRRFGRPPSAGRR 338
           GY   ++F  AF+++FG  P   RR
Sbjct: 267 GYSNVSHFGAAFRKQFGILPREARR 291