Pairwise Alignments

Query, 597 a.a., nickel-dependent hydrogenase large subunit from Rhodopseudomonas palustris CGA009

Subject, 596 a.a., Nickel-dependent hydrogenase, large subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 470/594 (79%), Positives = 530/594 (89%)

Query: 3   NVTTPNGFKLDNAGRRVVVDPVTRIEGHLRVEVNVDSNNVIRNAVSTGTMWRGIEVILKG 62
           +VTTPNGF L++AGRRVVVDPVTRIEGHLR+E+NVD  NVIRNAVSTGTMWRGIE+ILKG
Sbjct: 2   SVTTPNGFTLNDAGRRVVVDPVTRIEGHLRIELNVDEANVIRNAVSTGTMWRGIELILKG 61

Query: 63  RDPRDAWAFTQRICGVCTGTHALTSVRAVENALKINVPENANTIRNIMQLALYVHDHLVH 122
           RDPRDAWAFTQRICGVCTGTHALTSVRA+EN L I +PENAN+IRNIMQL L VHDHLVH
Sbjct: 62  RDPRDAWAFTQRICGVCTGTHALTSVRAIENTLGIQIPENANSIRNIMQLCLQVHDHLVH 121

Query: 123 FYHLHALDWVDVVSALKADPKATSALAQSISPWPMSSPGYFKDLQIRLTKFVESGQLGPF 182
           FYHLHALDWVDVVSAL ADPKATSALAQS+SPWP+SSPGYF D++ +LT+FVESGQLGPF
Sbjct: 122 FYHLHALDWVDVVSALSADPKATSALAQSLSPWPLSSPGYFSDIKAKLTRFVESGQLGPF 181

Query: 183 KNGYWGHPAYKLPPEANLMAVAHYLEALDFQKEIVKIHTIYGGKNPHPNWLVGGVPCSIN 242
           KNGYWGHPAY+LPPEANLMAVAHYLEALDFQKEIVKIH ++GGKNPHPNWLVGGVPC+IN
Sbjct: 182 KNGYWGHPAYRLPPEANLMAVAHYLEALDFQKEIVKIHAVFGGKNPHPNWLVGGVPCAIN 241

Query: 243 VDGTGAVGAINIERLNLVSSIIDQTVAFVEQVYVPDLVAIAGFYKDWLYGGGLSSKSVMS 302
           +DG GAVGA+NIERLNLVSSIID+   FVEQVY+PDL+AIAGFYKDW YGGGLSS SV++
Sbjct: 242 LDGAGAVGAVNIERLNLVSSIIDRATTFVEQVYLPDLIAIAGFYKDWQYGGGLSSTSVLA 301

Query: 303 YGDLPEYANDYSDKSLMLPRGVIINGNLNEVLPVDLSAPDQIQEFVTHSWYKYADEGKGL 362
           YGD+P+ ANDYS  +L++P G IING L  + PVDL+ P+QIQEFV+HSWY+Y DE KGL
Sbjct: 302 YGDIPDRANDYSPSNLLMPSGAIINGELTRIHPVDLTDPEQIQEFVSHSWYRYGDEAKGL 361

Query: 363 HPYDGVTEPNFVLGPNAKGTRTNIEALDESAKYSFLKAPRWKGHAVEVGPLARYIIGYAQ 422
           HP+DGVTE +F LGP +K     IE LDESAKYS+LKAPRW+GHA+EVGPLARYI+GYAQ
Sbjct: 362 HPWDGVTESHFELGPRSKVENRRIETLDESAKYSYLKAPRWRGHAMEVGPLARYILGYAQ 421

Query: 423 GKPEFKEPTEKLLKTLDVPVTALFSTLGRTAARGLECQWAARKLRAAQDKLMASIKAGDL 482
           G PEFKEPTE LL+ LD+PV ALFSTLGRTAARGLECQWAA KLR   DKLMA++KAGDL
Sbjct: 422 GNPEFKEPTEALLRQLDLPVGALFSTLGRTAARGLECQWAAGKLRYFFDKLMANLKAGDL 481

Query: 483 STANTDKWHPSSWPKDVKGVGFTEAPRGALAHWVKIKDTRIDNYQCVVPTTWNGSPRDPQ 542
           +TANT KW P++WP   KGVGFTEAPRGALAHWV+I+  +I NYQCVVPTTWNGSPRDP 
Sbjct: 482 NTANTTKWAPATWPASAKGVGFTEAPRGALAHWVQIEAGKIANYQCVVPTTWNGSPRDPA 541

Query: 543 GNIGAFEAALLDTPMADPNQPLEIIRTLHSFDPCLACSTHVMSEDGQEMAQVKV 596
           G IGAFEAALLDTP+ADP QPLE++RTLHSFDPCLACSTH+++ +G E   V V
Sbjct: 542 GAIGAFEAALLDTPLADPQQPLEVLRTLHSFDPCLACSTHILTPEGGEAISVTV 595