Pairwise Alignments

Query, 370 a.a., hydrogenase small subunit from Rhodopseudomonas palustris CGA009

Subject, 361 a.a., Ni-Fe hydrogenase, small subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  594 bits (1532), Expect = e-174
 Identities = 276/353 (78%), Positives = 304/353 (86%)

Query: 5   TETFYEVIRRQGITRRSFVKFCSLTATSLGLGPIGATQIAHALETKPRVPVIWMHGLECT 64
           TETFYEVIRRQGI+RR F+KFC +TA  LGLG  GA +IA ALETKPRVPVIW+HGLECT
Sbjct: 4   TETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGLECT 63

Query: 65  CCSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQADAILEETRKKYKGQYVLAVEGN 124
           CCSESFIRSAHPLV D VLSM+SLDYDDT+MAAAGHQA+AIL ETR+ Y+G+Y+LAVEGN
Sbjct: 64  CCSESFIRSAHPLVSDVVLSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAVEGN 123

Query: 125 PPLNEDGMFCIDGGRPFVEKLKEMAEDSMAVIAWGSCASWGCVQAAKPNPTNATPIDKVI 184
            PL  DG FC+ GGRPFV+ LKEMA DS AVIAWGSCASWGCVQAAKPNPT A PID+VI
Sbjct: 124 APLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSCASWGCVQAAKPNPTGAVPIDQVI 183

Query: 185 RNKPVIKVPGCPPIAEVMTGVVSYIITFGRLPELDRQGRPKMFYSQRIHDKCYRRPHFDA 244
             KP+IKVPGCPPIAEVMTGV+SY++TF R PELD QGRPKMFYSQRIHDKCYRR HFDA
Sbjct: 184 TGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGHFDA 243

Query: 245 GQFVEEWDDDGARKGYCLYKMGCKGPTTYNACSTVRWNGGVSFPIQSGHGCIGCSEDAFW 304
           GQFVE +DDD AR+G+CLYKMGCKGPTTYNACST  WN G SFPIQSGHGC+GCSED FW
Sbjct: 244 GQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSEDGFW 303

Query: 305 DKGSFYDRLTTINQFGIEANADKIGATVAGVVGTAIAAHAAVTTVRNLSRRKE 357
           DKG FY+RL+TINQFGIEANAD +G T AGVV   +AAHA VT  R L  + E
Sbjct: 304 DKGPFYERLSTINQFGIEANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNE 356