Pairwise Alignments

Query, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

Subject, 542 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  201 bits (511), Expect = 6e-56
 Identities = 158/529 (29%), Positives = 248/529 (46%), Gaps = 35/529 (6%)

Query: 22  HDRTINDDLDACVAHCPDKVALTAVRLDGGAVRRFSYRELATLADRVAVGLNRLGVGRGD 81
           H  TI D L       P+++AL          RR+S++ L   A+RVA  L  LG+ + D
Sbjct: 12  HRNTIGDALQRIAMRSPEQIALQYRE------RRWSFQALDRAANRVANHLLALGLSKAD 65

Query: 82  VVAMQLPNWWQFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKVLVVPKSFRGFD 141
            VA    N   + +L+LAC+R G +  P+     E EL+++L    A+ L V  S +G  
Sbjct: 66  RVAAYGKNSDAYLILWLACTRAGLIHVPVNYSLTEHELAYVLDQSGARALFVDDSLKG-- 123

Query: 142 HEAMARSLQPDLPALRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQGSR----PSPD 197
                  L   +PA R + +     +++     TT +   + D   I  GS     P  D
Sbjct: 124 -------LVDRIPAQRQLAIRGSLHSNE-----TTSD---RSDILRIATGSACDLPPEVD 168

Query: 198 ----DITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRLALRESDVILMASPMAHQTGF 253
               D+ Q++YTSGTT +PKG MHS  +LM         L ++ SD  L A P+ H    
Sbjct: 169 IAETDVVQILYTSGTTSDPKGAMHSHRSLMTEYSSCLLHLDIKASDRCLAALPLYHSAQM 228

Query: 254 MYGLMMPIMLRASAVLQDIWEPTKAAELIRTERVTFTMASTPFLTDLTRVVKESGEPVPS 313
               M  ++  A + L D   P +   L++TE++    A       L R  +     +  
Sbjct: 229 HVFTMPALLAGAFSCLTDTPTPEEILRLLKTEQLNSFFAPPTVWIALLRHEQFVEAQLRH 288

Query: 314 LKTFLCAGAPIPGPLVEQAQAGLGAK-IVSAWGMTENGAVTLIKLDDDDKLASTTDGCPL 372
           ++      + +P P+  +  A L    + + +G +E   +  +   ++ +   T+ G P+
Sbjct: 289 VQKLYYGASIMPEPIARELGARLPQSGLYNCYGQSEIAPLATVLTPEEHRERPTSCGRPV 348

Query: 373 PGVEVKVID-GDGKTLPPNQIGRLVVRSCSNFGGYLKRPHWNGTD-ADGWFDTGDLAYMT 430
             V  ++ID   G+   P   G LV RS     GY ++P       ADGWF +GDL Y  
Sbjct: 349 SNVLTRIIDPSTGEECAPGVAGELVHRSPQLMVGYWEKPAETAEAFADGWFHSGDLGYRD 408

Query: 431 ADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPAVAQVAIVAYPDERLGERACAVVVP 490
           A GYI I  R KD++  GG  +   +VE  LY+HP VA+VA++  PD++  E   AVVV 
Sbjct: 409 AQGYIWIVDRIKDIVNTGGVLVASRDVEEALYRHPHVAEVAVIGVPDQKWIEAIAAVVVL 468

Query: 491 KTGASIDFAAMVEFLKAQKLALQYIPERLVVRDAMPATPSGKIQKFRLR 539
           K  A++D  A++   +A  LA   +P+ +   + +P   SGK+ K  LR
Sbjct: 469 KQNATLDAQALLHHARAH-LAPFKVPKHVHFVEQLPKNSSGKLLKRVLR 516