Pairwise Alignments

Query, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

Subject, 560 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  228 bits (580), Expect = 6e-64
 Identities = 174/537 (32%), Positives = 256/537 (47%), Gaps = 26/537 (4%)

Query: 25  TINDDLDACVAHCPDKVALTAVRLDGGAVRRFSYRELATLADRVAVGLNRLGVGRGDVVA 84
           TI    D  V   P + AL           R+++ ELA   DR A GL  LG+  G+ V 
Sbjct: 19  TIGAAFDRTVERFPQREALVVRHQQ----LRYTWAELAEAVDRCARGLLALGLQAGERVG 74

Query: 85  MQLPNWWQFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKVLVVPKSFRGFDHEA 144
           +  PN  Q+ +   A ++IG VL  + P +R  EL + LK    + L+   +F+  D+ A
Sbjct: 75  IWSPNNAQWCITQFATAKIGVVLVNINPAYRLSELEYALKQSGCRWLICADAFKTSDYHA 134

Query: 145 MARSLQPDL-------------PALRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQ- 190
           M   L P+L             P LR ++ +     D         E  +Q     + Q 
Sbjct: 135 MLHELLPELESAAVGALQSHMLPELRGVISLCDKPVDGMLQWQALMEMAEQVGPEQLRQC 194

Query: 191 GSRPSPDDITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRLALRESDVILMASPMAHQ 250
           G R   DD   + YTSGTTG PKG   S   ++ N     + L L E D +++  P+ H 
Sbjct: 195 GERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGESLRLTEHDRLVIPVPLYHC 254

Query: 251 TGFMYGLMMPIMLRASAVLQDI-WEPTKAAELIRTERVTFTMA-STPFLTDLTRVVKESG 308
            G + G +  +    + +     +EP  A +    E+ T      T F+  L    ++S 
Sbjct: 255 FGMVMGNLGCVTHGTTMIYPSAAFEPLAALQAAAEEKATGMYGVPTMFIAMLDHPERQSL 314

Query: 309 EPVPSLKTFLCAGAPIPGPLVEQAQAGLG-AKIVSAWGMTENGAV-TLIKLDDDDKLAST 366
           + + SL+T + AG+  P  ++++    +  A++  A+GMTE   V T    DDD +   T
Sbjct: 315 D-LSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAYGMTETSPVSTQTSADDDLERRVT 373

Query: 367 TDGCPLPGVEVKVIDGDGKTLPPNQIGRLVVRSCSNFGGYLKRPHWNGTDADG--WFDTG 424
           + G   P +E K++D  G  +P  QIG L  R  S   GY   P       DG  W  TG
Sbjct: 374 SVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTG 433

Query: 425 DLAYMTADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPAVAQVAIVAYPDERLGERA 484
           DLA M  +GYI+I GR+KD+IIRGGEN+   E+E  L+ HPAVA V ++  PD + GE  
Sbjct: 434 DLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEI 493

Query: 485 CAVVVPKTGASIDFAAMVEFLKAQKLALQYIPERLVVRDAMPATPSGKIQKFRLREM 541
            A V    G  ++  A+ EF K  ++A    P  +   D  P T SGK+QKFR+RE+
Sbjct: 494 VAWVKLHPGHEVEGEALREFCKG-RIAHFKTPRHIKFVDDFPMTISGKVQKFRMREI 549