Pairwise Alignments

Query, 400 a.a., DNA recombination protein RmuC from Rhodopseudomonas palustris CGA009

Subject, 409 a.a., RmuC DNA recombination family protein from Phaeobacter inhibens DSM 17395

 Score =  283 bits (724), Expect = 6e-81
 Identities = 156/375 (41%), Positives = 227/375 (60%), Gaps = 23/375 (6%)

Query: 27  LVLLTTIVVLIARGSATRRTAEIDQRLALLMRAQHEANGRVDAMGRALAGRQAEMARAMS 86
           LV+L  +++L A   A +  A I Q++A L ++  +  G V  +  A A  Q +M + + 
Sbjct: 24  LVVLILLMMLRANARAVQSIAPIAQQMAHLGQSVQQLRGGVQHVSDAQANAQVQMIQTVE 83

Query: 87  ERLDSVTH----------------------RFGQSLTQSTRYTMQSLQALHERLGIIDRA 124
            RL +V                        R  +SL  ST+ T+ SL  L ERL +ID+A
Sbjct: 84  TRLSAVQQQVNDRLSDNALRQARALADMQERLQESLHGSTKRTVTSLTQLQERLAVIDKA 143

Query: 125 HDNLTELTDQVTTLRDVLANKQARGAFGQARMETIVQDGLPKGSFAFQYTLSTGKRPDCV 184
            DN+T+L+  V  L+D+LANKQ RGAFG+ ++  IV   LP  S+AFQ+TLS GKR DC+
Sbjct: 144 QDNITKLSGDVLGLQDILANKQTRGAFGEIQLNDIVSKALPADSYAFQHTLSNGKRADCL 203

Query: 185 VLMPNQP-PLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLIPGE 243
           + +PN P P+ ID+KFPLE   ALR A T+E + +A+++L+  +  H+  I+ KY++ GE
Sbjct: 204 IYLPNPPGPIVIDSKFPLEPYEALRNADTQEQRASAARQLKAALRAHIRAISEKYILDGE 263

Query: 244 TQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDARMRD 303
           T D ALMF+PSE+VYAE+H  F D++++ + A+V +VSP+  M  +  M+ ILKDARMR+
Sbjct: 264 TADGALMFLPSEAVYAELHANFSDIVREGFSAKVWIVSPTTCMATLNTMRAILKDARMRE 323

Query: 304 AADQIRTEVLSLGDDLARLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEELDFT 363
            A  IR+E+  L  D+ RL +RV  L  HFG    D+ +I ISADK  RRA R++  DF 
Sbjct: 324 QAGAIRSELAHLHKDVERLGDRVGNLDRHFGMAAKDIAEIKISADKAGRRAQRLDNFDFE 383

Query: 364 DQAAGTASAPAPEAP 378
           + AA +A    P  P
Sbjct: 384 EIAAPSAGIGQPGDP 398