Pairwise Alignments

Query, 400 a.a., DNA recombination protein RmuC from Rhodopseudomonas palustris CGA009

Subject, 409 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 74/334 (22%), Positives = 154/334 (46%), Gaps = 21/334 (6%)

Query: 46  TAEIDQRLALLMRAQHE---ANGRVDAMGRALAGRQAE-MARAMSERLDSVTHRFGQSLT 101
           T  ++Q +  L    H+    NG +         RQ E + ++  +RLD +     + L 
Sbjct: 60  TQTLNQNMQQLQDVLHKNMMTNGELQRQKFDTMARQQEVLIKSTEKRLDDMRLMVEEKLQ 119

Query: 102 QSTRYTM-QSLQALHERLGIIDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIV 160
           ++    + QS + +  +L  + +    +  L   V  L+ VL+N + RG FG+ ++  ++
Sbjct: 120 KTLNERIGQSFEIVRSQLENVQKGLGEMKSLAQDVGGLKKVLSNVKMRGTFGEVQLGALL 179

Query: 161 QDGL-PKGSFAFQYTLSTGKR-PDCVVLMPNQPP------LCIDAKFPLEAVTALR---E 209
           +  + P+   A   T  +G    +  + +P +        L IDAKFP +         E
Sbjct: 180 EQMMSPEQYDANVKTKKSGTEFVEFAIKLPGKDDANSTVYLPIDAKFPKDVYEQYYDAFE 239

Query: 210 ATTEEAKKAASQRLRTDVMRHVDDIASKYLIPGETQDTALMFVPSESVYAEI--HDGFDD 267
           A      +++ ++L T + +   DI  KY+ P  T D A+MF+P ES+YAE+       +
Sbjct: 240 AGDTALMESSGKQLETTIKKMAKDIHDKYVDPPFTTDFAIMFLPFESIYAEVIRRTSLVE 299

Query: 268 VIQKAYRARVVLVSPSLLMLAIQVMQQILKDARMRDAADQIRTEVLSLGDDLARLRERVT 327
            +QK Y  ++V+  P+ L   +  +Q   +   ++    ++ T + ++  + ++    + 
Sbjct: 300 TLQKEY--KIVVTGPTTLGAILNSLQMGFRTLAIQKRTGEVWTVLGAVKTEFSKFGGLLE 357

Query: 328 KLQTHFGQVTDDVRQILISADK-IERRAARIEEL 360
           K+Q +     D + +++    + IER+  ++E+L
Sbjct: 358 KVQKNLQSAGDQLEEVMGKRTRAIERKLRQVEQL 391