Pairwise Alignments

Query, 883 a.a., translation initiation factor IF-2 from Rhodopseudomonas palustris CGA009

Subject, 900 a.a., Probable translation initiation factor if-2 InfB from Mycobacterium tuberculosis H37Rv

 Score =  522 bits (1345), Expect = e-152
 Identities = 319/735 (43%), Positives = 427/735 (58%), Gaps = 50/735 (6%)

Query: 177 AEPAKKPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAA----------EAGDDDEAP 226
           A P   P         A P RP       P P GRP A  A            G    AP
Sbjct: 187 ASPGSMPPRPGGAVGGARPPRPGA-----PRPGGRPGAPGAGRSDAGGGNYRGGGVGAAP 241

Query: 227 R--MIRRPGGPARPAPPPKQPAA----KPGASKQRGRLTVVTALNADDVRERSIASFRRR 280
                 RPGG     P  +  AA    +PG + +RGR +        D  +  +    R 
Sbjct: 242 GTGFRGRPGGGGGGRPGQRGGAAGAFGRPGGAPRRGRKSKRQKRQEYDSMQAPVVGGVRL 301

Query: 281 TQRLKGHASNEPKEKLVREVVIPEVIAIQELANRMSERAVDVIRLLMKQGAMHKITDVID 340
                 H + E        + +    ++ + A+++      +++ L   G M   T  + 
Sbjct: 302 P-----HGNGET-------IRLARGASLSDFADKIDANPAALVQALFNLGEMVTATQSVG 349

Query: 341 ADTAQLIAEELGHTVKRVAASDVEEGLFDVVDDS--------TDTEPRSPVVTVMGHVDH 392
            +T +L+  E+ + V+ V+  D +  L +  D S         D + R PVVTVMGHVDH
Sbjct: 350 DETLELLGSEMNYNVQVVSPEDEDRELLESFDLSYGEDEGGEEDLQVRPPVVTVMGHVDH 409

Query: 393 GKTSLLDALRHANVVSGEAGGITQHIGAYQVTSPESGKK--ITFIDTPGHAAFTAMRARG 450
           GKT LLD +R ANV   EAGGITQHIGAYQV     G +  ITFIDTPGH AFTAMRARG
Sbjct: 410 GKTRLLDTIRKANVREAEAGGITQHIGAYQVAVDLDGSQRLITFIDTPGHEAFTAMRARG 469

Query: 451 AKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKPDRVRTDLLQHN 510
           AK TDI +LVVAADDGVMPQT+EAINHA+AA VPI+VA+NKIDK  A P ++R  L ++ 
Sbjct: 470 AKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAVNKIDKEGADPAKIRGQLTEYG 529

Query: 511 VQVESMGGDVVDVEVSAKNKINLDKLLEMIALQAE-ILELKTNTQRPAEGTVIEAKLDRG 569
           +  E  GGD + V++SAK   N++ L E + L A+  L+L+ N    A+G  IEA LDRG
Sbjct: 530 LVPEEFGGDTMFVDISAKQGTNIEALEEAVLLTADAALDLRANPDMEAQGVAIEAHLDRG 589

Query: 570 RGPVATVLVQRGTLRVGDIIVAGAEMGRVRALISDQGETVQEAGPSVPVEVLGFNGPPEA 629
           RGPVATVLVQRGTLRVGD +VAG   GRVR ++ + GE V+ A PS PV+V+GF   P A
Sbjct: 590 RGPVATVLVQRGTLRVGDSVVAGDAYGRVRRMVDEHGEDVEVALPSRPVQVIGFTSVPGA 649

Query: 630 GDRLAVVENEARARQITDYRAHQKREKSAASVSGMRGSLEQMMTQLKTSGRKEFPLIVKA 689
           GD   VV+ +  ARQI D R+ +KR   AA  S  R SLE + + LK +   +  LI+K 
Sbjct: 650 GDNFLVVDEDRIARQIADRRSARKRNALAAR-SRKRISLEDLDSALKET--SQLNLILKG 706

Query: 690 DVQGSLEAILGSLEKLGT-DEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEA 748
           D  G++EA+  +L  +   DEV  R++  GVGGI+E++V LA   +AVI+GF+VRA  +A
Sbjct: 707 DNAGTVEALEEALMGIQVDDEVVLRVIDRGVGGITETNVNLASASDAVIIGFNVRAEGKA 766

Query: 749 AAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAG 808
              A R G+EIRYY++IY  +D+I++A+ GLL P   E  LG A+I  +F  SKVG +AG
Sbjct: 767 TELASREGVEIRYYSVIYQAIDEIEQALRGLLKPIYEENQLGRAEIRALFRSSKVGLIAG 826

Query: 809 CRVTDGTVERGANVRLIRDNVVVHEG-KLSTLKRFKDEVKEVVAGQECGMAFENYTDMRA 867
           C VT G + R A  RL+RDN+VV E   +++L+R KD+V EV  G ECG+    Y D++ 
Sbjct: 827 CLVTSGVMRRNAKARLLRDNIVVAENLSIASLRREKDDVTEVRDGFECGLTL-GYADIKE 885

Query: 868 GDIIECYRVETIQRS 882
           GD+IE Y +   +R+
Sbjct: 886 GDVIESYELVQKERA 900