Pairwise Alignments

Query, 883 a.a., translation initiation factor IF-2 from Rhodopseudomonas palustris CGA009

Subject, 1009 a.a., protein translation initiation factor 2 IF-2 from Caulobacter crescentus NA1000

 Score =  776 bits (2003), Expect = 0.0
 Identities = 442/854 (51%), Positives = 558/854 (65%), Gaps = 40/854 (4%)

Query: 57   PAAPAAPEVAKKPAPAPAAP----PRQQQSRPAPQQSRSGMVLRTLTEDE---RTARATA 109
            PAAP AP    +   AP+AP    PRQ     AP Q+R+    R   +D     T R   
Sbjct: 168  PAAPQAPRPVAQAPVAPSAPRQDAPRQDTRAAAPGQTRTYEPSRDRRDDRPSTTTYRPAP 227

Query: 110  LADARVREIEERKQAEIEAQRRAEQEKIEKAEREAAEARRKAEEERHRQEDEAKRKAETE 169
              D    +   R  A     +RA + + ++      +  R   +    + D  +      
Sbjct: 228  QGDRPFNQRAPRPDANANFGQRAPRPEGDRPRGPRPDGDRPQGDRGGYRGDRPQ------ 281

Query: 170  AKKRFGDAEPAKKPAETSTTTTTAAPARPATTTTRTPTPAGRP--PAVAAEAGDDDEAPR 227
                 GD     +P +T   +  A    P       P    RP  PA A    +   A R
Sbjct: 282  -----GDRPQGDRPQQTVRYSALAPRPAPGARGPGGPPRGPRPGVPAAAPATPEIQRATR 336

Query: 228  MIRRPGGPA---RP---------APPPKQPAAKPGASKQR-GRLTVVTALNADDV--RER 272
               RPGG A   RP         A P K  +   GA ++R GRLT+       D   R R
Sbjct: 337  SAPRPGGGAMDRRPDEDDDRRKNAAPNKAVSRVKGAPQRREGRLTIQAVAGDGDSADRMR 396

Query: 273  SIASFRRRTQRLKGHASNEPKE--KLVREVVIPEVIAIQELANRMSERAVDVIRLLMKQG 330
            S+AS RR  +R K        E  ++ REVVIP+VI +QEL+NRM+ R VD+I+ LM+QG
Sbjct: 397  SLASVRRAREREKEKRRGGAVEQARVAREVVIPDVITVQELSNRMAVRGVDIIKFLMRQG 456

Query: 331  AMHKITDVIDADTAQLIAEELGHTVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHV 390
             M KI DVID DTA+L+A E GHTVKRV+ +DVEEG     D     + R PVVT+MGHV
Sbjct: 457  VMLKINDVIDNDTAELVATEFGHTVKRVSEADVEEGFIGADDHDEHMDLRPPVVTIMGHV 516

Query: 391  DHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPGHAAFTAMRARG 450
            DHGKTSLLDALR  +V +GEAGGITQHIGAYQV   + G+++TF+DTPGHAAF++MRARG
Sbjct: 517  DHGKTSLLDALRSTDVAAGEAGGITQHIGAYQVRLKD-GQRVTFLDTPGHAAFSSMRARG 575

Query: 451  AKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKPDRVRTDLLQHN 510
            A +TDIVVLVVA DDGVMPQTIEAI HAKAA VPIIVA+NK+DKP + P RV  +LLQH 
Sbjct: 576  ANITDIVVLVVAGDDGVMPQTIEAIKHAKAAEVPIIVAVNKMDKPGSDPTRVVNELLQHE 635

Query: 511  VQVESMGGDVVDVEVSAKNKINLDKLLEMIALQAEILELKTNTQRPAEGTVIEAKLDRGR 570
            + VES+GGD   +EVSAK +  LD LLE I LQAE+L+LK N  R A+G VIEAKLD+GR
Sbjct: 636  IVVESLGGDTQLIEVSAKARTGLDNLLEAILLQAEVLDLKANPDRSADGVVIEAKLDKGR 695

Query: 571  GPVATVLVQRGTLRVGDIIVAGAEMGRVRALISDQGETVQEAGPSVPVEVLGFNGPPEAG 630
            G V+TVLV RGTL+ GDI+VAG++ G+VRAL++++ E +QEAGP+ PVE+LG +G P  G
Sbjct: 696  GAVSTVLVNRGTLKRGDIVVAGSQWGKVRALLNERNEQLQEAGPATPVEILGLDGVPSPG 755

Query: 631  DRLAVVENEARARQITDYRAHQKREKSAASVSGMRGSLEQMMTQLKTSGRKEFPLIVKAD 690
            D  AVVENEARAR++T+YR   KREKS A V G   S+  MM +L+    KE PL++KAD
Sbjct: 756  DAFAVVENEARARELTEYRIRLKREKSMAPV-GAGASMADMMAKLQDKKLKELPLVIKAD 814

Query: 691  VQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEAAA 750
            VQGS EAI+GSL+K+ TDEV ARI+ +G G ISESDV LA+G  A ++GF+VRA+ +A A
Sbjct: 815  VQGSAEAIIGSLDKMATDEVRARIILSGAGAISESDVMLAKGAGAPVIGFNVRASAQARA 874

Query: 751  AAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAGCR 810
             A+R G+EIRYY IIYDL+DDIK  +SG+LAP  RET LGNA++L+ F+ISK+GKVAGC+
Sbjct: 875  LAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKIGKVAGCK 934

Query: 811  VTDGTVERGANVRLIRDNVVVHE-GKLSTLKRFKDEVKEVVAGQECGMAFENYTDMRAGD 869
            VT+G V +GA VR+IR ++VV E G L TLKRFKDEV EV  GQECGM F  + D++ GD
Sbjct: 935  VTEGVVRKGAKVRIIRQDIVVLELGTLQTLKRFKDEVNEVPVGQECGMMFAGFQDIKVGD 994

Query: 870  IIECYRVETIQRSL 883
             IEC+ VE I+R L
Sbjct: 995  TIECFTVEEIKRQL 1008



 Score = 88.2 bits (217), Expect = 2e-21
 Identities = 89/295 (30%), Positives = 123/295 (41%), Gaps = 50/295 (16%)

Query: 7   PGDKTLTMPTKTLTLKPR---VEQGVVRQSFSHGRSKQVVVEKRGKR--RLGGDEPAAPA 61
           PG +T       +TLKPR   V  GVV+QSFSHGR+K VVVE +  R         AAP+
Sbjct: 10  PGGRT------PMTLKPRQGSVSAGVVKQSFSHGRTKTVVVETKRTRTHAPASGNLAAPS 63

Query: 62  APEVAKKPAPAPAAPPRQQQSRPAPQQSRSGMVLRTLTEDERTARATALADARVREIEER 121
           + E     APAP         RPAP Q   G     L+++E  AR               
Sbjct: 64  SAERRHGEAPAP---------RPAPPQGGGGGSAGGLSQEELRAR--------------- 99

Query: 122 KQAEIEAQRRAEQEKIEKAEREAAEARRKAEEERHRQEDEAKRKAETEAKKRFGDAEPAK 181
            Q  ++A R A+  ++  AE+ AAEAR +A +E  ++E  AK  AE  A      A+   
Sbjct: 100 -QRVVDAAREAQARQV--AEQAAAEARARAAQEAAQREAAAKAAAERAAAAPPPVAQAPA 156

Query: 182 KPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAAEAGDDDEAPRMIRRPGGPARP--- 238
            PA        AAP  P     + P P  + P   A +    +APR   R   P +    
Sbjct: 157 APA-------PAAPVTPPPAAPQAPRPVAQAP--VAPSAPRQDAPRQDTRAAAPGQTRTY 207

Query: 239 APPPKQPAAKPGASKQRGRLTVVTALNADDVRERSIASFRRRTQRLKGHASNEPK 293
            P   +   +P  +  R         N    R  + A+F +R  R +G     P+
Sbjct: 208 EPSRDRRDDRPSTTTYRPAPQGDRPFNQRAPRPDANANFGQRAPRPEGDRPRGPR 262