Pairwise Alignments

Query, 837 a.a., PAS-domain containing protein from Rhodopseudomonas palustris CGA009

Subject, 826 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  573 bits (1477), Expect = e-167
 Identities = 325/818 (39%), Positives = 464/818 (56%), Gaps = 16/818 (1%)

Query: 22  LAGTAVMVASSPARAADDHLAAITSSLLLDLNRHEMMTLIIALAALGFSVMSAIMLVRTR 81
           LAGT ++ AS  A  A D   +I  +        E++T  + +  +  +++SAI L+R R
Sbjct: 23  LAGTVLLAASDAAAQATDPGRSIFGT-------SEVVTFSVLIGVISAAMISAIWLIRQR 75

Query: 82  QRAVAREAGLRADLQGLQAESDRFQALLFAEPQVLISWAAGDSRPQVSGDTALFLPLETQ 141
               A    LR++L        RFQAL+  + + ++ W     RP+  G     LP ET 
Sbjct: 76  GNIEAENRELRSNLSDANQRISRFQALIADKNRRIVIWDGLAERPEFLGQ----LPAETG 131

Query: 142 SRQPQR-VLAFGTWLPPEPALQMDHAVDALLDKGEGFLLQLVTSNGRSIEAMGRAVGGQA 200
           + Q  R  LAFG W+ P+ A Q++ A++AL  + + F L L T     +EA GR  GG+A
Sbjct: 132 APQDDRDFLAFGRWIKPQSAGQLEKAIEALRAQAQSFDLVLETQRNEVLEAQGRVSGGRA 191

Query: 201 VVRIRELSGVRRELADMTRRFKALQEETEMLRGFATAAPWPIWTRRSDGTLSFANAAYAR 260
            VR   L+ +R ELA++      L       R    A   P W R  DG L + NAAYA 
Sbjct: 192 FVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRGGDGRLQWVNAAYAN 251

Query: 261 ATDASDAADAIGRNLELLDSGDRAALARALGDGYEYSGRLPIVVGGERRYYDVRALKVSG 320
           A +   A+ A+    ELL +  R  +         +  ++  VV G R ++DV   +   
Sbjct: 252 AVETQSASTAVAEERELLATTARERIRAVSTLQTPFRDKVSTVVRGNRTFFDVVDARTPA 311

Query: 321 GSAGIAVDATETAALGAALERMADAHRRTLDQLSSGVAVFDAQRRLSFYNDSYRKLWDLD 380
           GSAGIA+D +   A+   L R   +H  TL+ L++ VA+FD  +RL FYN ++++LWDLD
Sbjct: 312 GSAGIAIDVSGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFYNQAFQRLWDLD 371

Query: 381 RIFLDSHPDDSTVLDRLRAERKLPEERDFKAWKNKLHEAYRAVEAEKDVWYLPDGRAVSI 440
             FL+  PD+  VLDRLRA  KLPE+ ++K WK      Y+A++ + D+W+LP+G+ + +
Sbjct: 372 MGFLERKPDNGEVLDRLRAGGKLPEQLNWKQWKTSALSVYQAIDTQSDLWHLPNGQTLRV 431

Query: 441 VTTPNPEGGVTYLFDDVTESLDLKRRYGGLIDVQRETLDNLSEAVAVFGSNGCAQLFNPP 500
             T  P+GG T++F+++TE +DL+ RY  L+ VQ ET+D+L+E VAVFG +G  +L NP 
Sbjct: 432 FATARPQGGATWVFENLTERVDLETRYNTLVQVQGETIDHLAEGVAVFGPDGRIRLSNPA 491

Query: 501 FARMWNLSAEALQSQPHIEAIEEWCRPLFDDDVFWQALRGAITGIDDRRHVLLKI-ERKD 559
           F  +W +S    Q   HI AIE+ C   +D    W+     IT  DD R     I E + 
Sbjct: 492 FRAIWGISETEAQPGTHIRAIEQACLASYDQPDGWKRFAHIITSFDDERPSSRGILELRT 551

Query: 560 GSVLACKTMPLPDGATMLTFQDITDTENVERALRERNEALETADRIKIDFVHHVSYELRS 619
           G +L    +PLP+  TMLTF +ITD+  VERAL E+NEAL  AD +K DFVHHVSYELRS
Sbjct: 552 GLILDYAVIPLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRS 611

Query: 620 PLTTIIGFAHFLSDSSTGPLTEKQAEYVNYITTSTNALMAIINNILDLASIDAGAMTLNL 679
           PLT IIGFA  L     G L E+QAEYV++I TS++ L+ I+N+ILDLA++DAG + L L
Sbjct: 612 PLTNIIGFADLLKTPVFGELNERQAEYVDHIATSSSLLLTIVNDILDLATVDAGIVELEL 671

Query: 680 GPIDIRKAIDAAAEGIQDRLARDQIALQIDVDPAIESFVGDERRVVQVLYNLLANAIDFS 739
             +++   ID   + + DRL    ++L+ D    +     D++R+ Q+   LL NA +F+
Sbjct: 672 SEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIFIKLLTNAANFA 731

Query: 740 PSQGTVRLTVRRGETRVAFTVTDSGPGIAPAFKEKMFDLFESDPQGSRHRGAGLGLSLVR 799
           P   T+ L   R  +  AF+VTD+GPGI       +F+ FES  Q     GAGLGLS+V 
Sbjct: 732 PDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQ---RGGAGLGLSIVE 788

Query: 800 SFVELHGGKVLVESAVGRGTSVTCEFPIEPAAQRHAAE 837
           SFV LH G V + S  G GT+VTC  P   A +  AAE
Sbjct: 789 SFVSLHHGNVSIRSKEGEGTAVTCRIPSAEAPKVIAAE 826