Pairwise Alignments

Query, 837 a.a., PAS-domain containing protein from Rhodopseudomonas palustris CGA009

Subject, 769 a.a., two-component sensor histidine kinase DivL from Caulobacter crescentus NA1000

 Score =  371 bits (952), Expect = e-106
 Identities = 228/663 (34%), Positives = 348/663 (52%), Gaps = 25/663 (3%)

Query: 169 ALLDKGEGFLLQLVTSNGRSIEAMGRAVGGQAVVRIRELSGVRRELADMTRRFKALQEET 228
           AL ++GE  + +    +G  +   GRA G  A +R+  +      L    R         
Sbjct: 113 ALFERGEPCVFEARGPHGL-VSVEGRAAGALAWLRLAPIDRADSGLPTAAR--------- 162

Query: 229 EMLRGFATAAPWPIWTRRSDGTLSFANAAYARATDASDA-ADAIGRNLELLDSGDRAALA 287
                F  +   P W   +DG   + NAA+ RA  A+ A A A+    +  D G  A + 
Sbjct: 163 --FAAFVDSVVEPCWIAGADGQAIWGNAAFVRAVGAASAQAPALAG--KSFDRGADAVVV 218

Query: 288 RALGDGYEYSGRLPIVVGGERRYYDVRALKVSGGSAGI-AVDATETAALGAALERMADAH 346
            A G G        I V G RR + + A  + GG  G+   D TE   +  A ++  +AH
Sbjct: 219 EAAGKGERREALRWINVEGRRRAFRLSAQPLDGGGVGVFCADVTEIEDVRDAFKKHVEAH 278

Query: 347 RRTLDQLSSGVAVFDAQRRLSFYNDSYRKLWDLDRIFLDSHPDDSTVLDRLRAERKLPEE 406
             TL+ ++  VA+F   RRLS++N ++ +LW L+  +L   P    VLDRLR  R+LPE 
Sbjct: 279 DETLNHIAEAVAIFSQTRRLSYHNTAFAELWGLEPAWLADRPTHGEVLDRLRQRRRLPET 338

Query: 407 RDFKAWKNKLHEAYRAVEAEKD-VWYLPDGRAVSIVTTPNPEGGVTYLFDDVTESLDLKR 465
            D+  WK      Y  +  + D +W LPDGR + +V  P+P GG+  ++ D+T  L LK 
Sbjct: 339 IDYAGWKAAELARYEDLGPQADDLWDLPDGRTLKVVRQPHPLGGMLLIYSDITGELRLKA 398

Query: 466 RYGGLIDVQRETLDNLSEAVAVFGSNGCAQLFNPPFARMWNLSAEALQSQPHIEAIEEWC 525
           +Y  LI VQ+ TLD L++AVAVFGS+G  +L N  F   WN++  AL++    E + E C
Sbjct: 399 QYNALIQVQQATLDKLNDAVAVFGSDGRLRLHNEAFETFWNVTPHALEAAGDFEGVVELC 458

Query: 526 RPLFDDDVFWQALRGAITGIDD--RRHVLLKIERKDGSVLACKTMPLPDGATMLTFQDIT 583
            P   D  FW+ L+G +   D   R     ++   D  ++  ++ PLPDGAT++ F D+T
Sbjct: 459 VPRLHDLSFWRELKGRVADPDPQMRAPTSGEVRTSDSRIVLYQSRPLPDGATLIAFADVT 518

Query: 584 DTENVERALRERNEALETADRIKIDFVHHVSYELRSPLTTIIGFAHFLSDSSTGPLTEKQ 643
           DT +++ AL +R+ AL  A+R+K DFV +VSYELR+PLTTIIG++  L  +    ++E+ 
Sbjct: 519 DTRDLQSALADRSAALAEAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD--GISERG 576

Query: 644 AEYVNYITTSTNALMAIINNILDLASIDAGAMTLNLGPIDIRKAIDAAAEGIQDRLARDQ 703
             +V  +  +   L   I+++LD+A IDAG M L +  I +   +  A E          
Sbjct: 577 RNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERALKDAQLGG 636

Query: 704 IALQIDVDPAIESFVGDERRVVQVLYNLLANAIDFSPSQGTVRLTVRRGETRVAFTVTDS 763
           + L ++ +  +    GD +R+ Q L +L+ NA+  +P  G V L+ RR    V   V+D+
Sbjct: 637 VTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDT 696

Query: 764 GPGIAPAFKEKMFDLFESDPQGSRHRGAGLGLSLVRSFVELHGGKVLVESAVGRGTSVTC 823
           G G+    +  +FD F    +G    G GLGL+LV++ VELHGG V +ES  G G++ TC
Sbjct: 697 GRGVPFHVQAHIFDRFVGRDRG----GPGLGLALVKALVELHGGWVALESEPGNGSTFTC 752

Query: 824 EFP 826
             P
Sbjct: 753 HLP 755