Pairwise Alignments

Query, 204 a.a., ribonuclease D from Rhodopseudomonas palustris CGA009

Subject, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 3/181 (1%)

Query: 12  DLSRYTHSVAIDTETMGLHPHRDRLCVVQLSNGDGSADVVQIPQGATDAPNLKKLLGDPA 71
           +L+R ++ + IDTE +        LC++Q+++ + +  V  +  G   AP    L+ +P 
Sbjct: 14  ELARSSY-ITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLAPFFA-LMSNPD 71

Query: 72  VVKIFHFARFDLAALYKTFGVMPQPVYCTKIASRLTRTYTDRHGLKDLVRELLGIDLSKQ 131
           VVK+FH AR D+  ++    ++P P++ T++A+ +   + D      LV  +    + K 
Sbjct: 72  VVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCG-FGDSVSYDQLVNRIKNEQIDKS 130

Query: 132 QQSSDWGADSLSDAQLAYAASDVLHLHALRDRLDTMLARENRTDLAAACFGFLPVRARLD 191
            + +DW    L+D QL YA +DV HL  +   L   L RE R+   A     L  R   D
Sbjct: 131 SRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMAILESRETYD 190

Query: 192 L 192
           L
Sbjct: 191 L 191