Pairwise Alignments

Query, 224 a.a., JAB domain-containing protein from Pseudomonas fluorescens SBW25-INTG

Subject, 233 a.a., DNA repair protein RadC (RefSeq) from Shewanella loihica PV-4

 Score =  236 bits (603), Expect = 2e-67
 Identities = 119/224 (53%), Positives = 153/224 (68%)

Query: 1   MSIRDWPAAERPREKLLEWGAASLSDAELLAIFLRTGVSGRSAVDLARHLLAQFGGLRPL 60
           M+I+DWP  E PREKLL  G A LSDAELLA+ LR G+ G+SAV LAR +L  FGGLR L
Sbjct: 9   MAIKDWPQGEGPREKLLRSGVAQLSDAELLAVLLRNGLKGQSAVSLARVMLTHFGGLRAL 68

Query: 61  LEASQALFNQQLGLGPAKFAQLQAVLEMAKRHMAERLRHDSVLESPKAVRDYLKAMLRHE 120
             AS +      G+GP K+AQLQA +E++KR   E L+   +L  P   RDYL   L   
Sbjct: 69  FSASLSELCDIQGIGPVKYAQLQAAIELSKRIAQENLQRGKILSDPDLTRDYLMRQLADR 128

Query: 121 PHEIFGCLFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKRALAYNAAALILCHNHPSGSL 180
            +E+F  L LDS+HRV+ F  L +GTID+A VYPR+VV   L   AAA+I+CHNHPSG  
Sbjct: 129 AYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGA 188

Query: 181 EPSAADRKLTKLLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWL 224
           EPS ADR++T+ L+ AL  +DV +LDH++VGD + +S AE GW+
Sbjct: 189 EPSHADRRITERLKYALATIDVSLLDHMVVGDREIVSFAERGWI 232