Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma factor from Pseudomonas fluorescens SBW25-INTG

Subject, 214 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.7 bits (234), Expect = 9e-25
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 6   LKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNL 65
           L  +F  +  +L G L R V+D Q+A DL QE++LR+        ID+ + +L+RTA NL
Sbjct: 39  LNAVFESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAESGPIDHIEAFLHRTARNL 98

Query: 66  LIDHIRQEARRK---TDSVPHEALAEIEDDVAGLEAQAMAQQQRQALKQALAELPERTQQ 122
            +DH+R+  RR    + +V   A+ ++ DD    E   + +Q    L +A+A LP+R + 
Sbjct: 99  ALDHLRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARL 158

Query: 123 IFRLNRIEGMTHAQVARHLDISDSSVQKHLAKALAY 158
           +  L+R+E   + ++A HL IS+ +V   L  AL +
Sbjct: 159 VLTLSRVEDWPNTKIAAHLGISERTVFNDLKLALGH 194