Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma factor from Pseudomonas fluorescens SBW25-INTG

Subject, 173 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score =  102 bits (253), Expect = 5e-27
 Identities = 55/156 (35%), Positives = 91/156 (58%), Gaps = 1/156 (0%)

Query: 15  DTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNLLIDHIRQEA 74
           D L+ ++ R+   P LAAD+VQ++++R A        DN + YLYR A+NL IDH+R++ 
Sbjct: 19  DDLKAFIVRRTGSPSLAADVVQDTWVRAASAEIAMP-DNVRAYLYRMAANLAIDHLRRDG 77

Query: 75  RRKTDSVPHEALAEIEDDVAGLEAQAMAQQQRQALKQALAELPERTQQIFRLNRIEGMTH 134
            R         L +I      ++    A+Q+   L +A+AELPE+ + +F L R  G+T 
Sbjct: 78  ARARGLCEETLLEDIPSAEPAVDRVVAARQELAILSRAVAELPEKCRIVFLLYRGRGLTM 137

Query: 135 AQVARHLDISDSSVQKHLAKALAYVMQRLQEGEVAP 170
            QVA  L IS+ +V+KH+A+A+ +  +R+ +   +P
Sbjct: 138 KQVAARLGISEKAVEKHIARAMVHCRKRMIDAGRSP 173