Pairwise Alignments

Query, 308 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

Subject, 311 a.a., ABC transporter, substrate-binding protein, aliphatic sulfonate from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (287), Expect = 2e-30
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 7/285 (2%)

Query: 22  SAWAAEPLTLTVGDQFFSNRIVLELSGELKDLPYT---IDFKRFNTGSPVASAVASGALD 78
           +A A EP TL +G Q  S  +VL     L +  +    I +  F  G  +  A+  G+LD
Sbjct: 19  TASADEPDTLRIGYQKGSITLVLAKENGLLEKRFPEKKIKWVEFPAGPQMLEALNIGSLD 78

Query: 79  VGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG--IHSVADLKGKTVAIWNGSW 136
           +   GD P I     GA +  + +         ++ R    +HSVA+LKG+ VA+  GS 
Sbjct: 79  IASTGDIPPIFAQVAGADLVYIGAEPPKPQVETLLVRNESPVHSVAELKGRKVALQKGSS 138

Query: 137 SQQLAYKALDEAGVPRSSVHFKYLLPAEASLALTQGDIDAFGTWEPYVSLQEKEG-SSLI 195
           S  +  + L++AG+    +   YL PA+A  A   G +DA+  W+PY S+   EG S L+
Sbjct: 139 SHNVVLRVLNKAGLTFKDIQPIYLTPADARAAFENGSVDAWAIWDPYYSIAMSEGHSRLL 198

Query: 196 RNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRAREWSNTHIDEYAEAWSKA-NQSA 254
            N +GL  +  +  A      + +A+++  +  LT A   S +   E  +  +++   S 
Sbjct: 199 ANGEGLGLSGPFYTARRAFAEENAALVQQVLDELTVADGLSRSQRAESIQILARSMGLSE 258

Query: 255 PEIAKVWFKRDAIKVLPISPTIVSEAQATADFLVDAQMLKQRYDV 299
             + +    R     LPI+P IV   QATAD   D  ++ +R D+
Sbjct: 259 AVMTQYLDHRPVSPSLPITPEIVRAQQATADLFYDNHLIPKRVDI 303