Pairwise Alignments

Query, 308 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

Subject, 323 a.a., ABC transporter, substrate-binding protein, aliphatic sulfonate from Pseudomonas syringae pv. syringae B728a

 Score =  256 bits (653), Expect = 7e-73
 Identities = 136/297 (45%), Positives = 195/297 (65%), Gaps = 6/297 (2%)

Query: 13  LASLTLQGPSAWAAEPLTLTVGDQFFSNRIVLELSGELKDLPYTIDFKRFNTGSPVASAV 72
           L  L L   ++   +   L VGDQ +S R V+E +G L+DLPY +++K+F  GSPVA A+
Sbjct: 13  LKGLALSLVASLNTQAANLIVGDQSYSARTVMEAAGVLEDLPYELEWKQFTAGSPVAEAL 72

Query: 73  ASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG--IHSVADLKGKTVA 130
             G+LD+G++GD+P + + A GAP+KV+  ++ +LDGV IV RK   I +VADL GK VA
Sbjct: 73  NVGSLDIGLLGDSPALFMGALGAPIKVIGVSRQNLDGVAIVVRKDSPIKTVADLAGKKVA 132

Query: 131 IWNGSWSQQLAYKALDEAGVPRSSVHFKYLLPAEASLALTQGDIDAFGTWEPYVSLQEKE 190
           IW GS+SQQL   ALD+AGV R +V ++YL   ++S AL  G +DA  TWEPYV+ QE++
Sbjct: 133 IWKGSFSQQLMLTALDKAGVARDAVDYRYLSALDSSHALDGGSVDAIATWEPYVTQQERQ 192

Query: 191 GSSLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRAREWSNT---HIDEYAEAW 247
           G+ +I  A+GL+ A ++IVA + A+  K A I DF+ RL  AR WS +   H + YA AW
Sbjct: 193 GARIIATAEGLIPAQSFIVANDQAIKDKRAQISDFLQRLQAARAWSVSDPQHNERYANAW 252

Query: 248 SKANQSAPEIAKVWFKRDAIKVLPISPTIVSEAQATADFLVDAQMLKQRYDVAPLFD 304
           S   ++  E+A+ WF R  + V+PI+  +V+ AQ T DF  +A + K RY  A +FD
Sbjct: 253 SALTKADAEVARRWFSRAQVVVVPITAQVVAGAQQTIDFFNNAGLTK-RYPAASVFD 308