Pairwise Alignments

Query, 162 a.a., type VI secretion system tube protein Hcp from Pseudomonas fluorescens SBW25-INTG

Subject, 166 a.a., Protein of unknown function DUF796 from Pseudomonas syringae pv. syringae B728a

 Score = 95.9 bits (237), Expect = 3e-25
 Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)

Query: 1   MAVDMFLKLGDIKGESRDQAHRDEIDITEWAWGLSQTGSMHSGTGGGA--GKADFANLNL 58
           MA D +LK+  I GE+ D   +D I++  +  G SQ+ S+ + + GGA  G+A  ++L  
Sbjct: 1   MAFDAYLKIDGIPGEALDAQFKDWIEMENFDLGASQSASVTATSAGGATSGRARMSDLFF 60

Query: 59  TKPLDKSSPNLMMACASGKHYPEARLVVRKAGGTSPVEYLVITLKEVMV--VSYGTGADS 116
            K +DK++P L  AC SGKH+ E  L V +A GT  ++YL I L+EV++  VS       
Sbjct: 61  RKTVDKATPKLHEACCSGKHFKEVTLAVNRA-GTDKLKYLEIVLEEVIISSVSLNGNGGV 119

Query: 117 KDDLLYDRIALNFASVDISYQPQKADGAKDGGPVKFGWNIRQN 159
           +     + + LN+  + ++Y  QK    + GG V  GW+   N
Sbjct: 120 EGGFPTETVRLNYGRIKMTYTQQKRADGQGGGQVVGGWDAISN 162