Pairwise Alignments

Query, 242 a.a., winged helix family transcriptional regulator from Pseudomonas fluorescens SBW25-INTG

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 49.3 bits (116), Expect = 6e-11
 Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 50  NYRAIIIEIDTPSASSQTLDIIRKTRNNNPGCTIFVVVTFASTLSKTKYYLAGAD-YCIK 108
           N+  +I+++  P      + ++R+ R       + V+    +   +     AGAD Y +K
Sbjct: 44  NFDVLILDLGLPDEDG--ISLLRRLRQQGMALPVLVLTARDAVSDRVTGLQAGADDYLLK 101

Query: 109 VVDTPP--EKKLSLFDAFLSESARLNQCG-LVLDQDRMCIYGDGKKLEISFVEMSVLEAL 165
             D      +  +L       S  + + G L  D DR  +  DG+ +++S  E ++L+AL
Sbjct: 102 PFDLRELAARLHTLMRRMAGRSVNIIEHGRLSYDPDRCEVRLDGQPVDLSRREQALLQAL 161

Query: 166 I--QRRLLSHNEIAAVMGLNTKYYDSRAMEKSISRLRSKIKAHYGENIIQNIRGYGYKL 222
           +  Q R+LS  ++   +       +S A+   I  LR K+    G  I++ +RG GY+L
Sbjct: 162 LNNQGRVLSSEQLKDAVYGFADDVESNALNVHIHHLRRKL----GNGIVETVRGLGYRL 216