Pairwise Alignments

Query, 300 a.a., transcriptional activator NhaR from Pseudomonas fluorescens SBW25-INTG

Subject, 300 a.a., Cys regulon transcriptional activator CysB from Acidovorax sp. GW101-3H11

 Score =  205 bits (522), Expect = 9e-58
 Identities = 107/288 (37%), Positives = 169/288 (58%), Gaps = 3/288 (1%)

Query: 3   NYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTEAG 62
           NYR L YFWVVAK G I RA E+L++  QTIS Q+  LE++ G++L +  GR L LT+AG
Sbjct: 6   NYRHLFYFWVVAKEGGIARAAERLDMAVQTISAQVRELEKSLGVSLLRTEGRNLVLTDAG 65

Query: 63  RRALPYAEQMFQTGNELEALLRAQPDEQQILFRVGVADVVPKSIVYRLIAPTMELSEP-I 121
             AL  A+ +F  G  L   +R     Q +   +G++D + K  V+RL+ P ++  EP +
Sbjct: 66  VAALHEADHIFALGELLPVRVREAASGQTLRLNLGISDGIAKLAVHRLLTPVLD--EPHL 123

Query: 122 RITCREDKLERLLADLAIQRLDLVISDSPMPTHLDIKGYSQKLGECGISFFATQALADAY 181
           R+ C E + + LL +LA+ +LD V++D   P +  ++  SQ LG   I+++A    A+A 
Sbjct: 124 RLLCHEGEFQPLLGELALHKLDAVLADRAAPPNPALRTTSQLLGSSAIAWYAPPLWAEAA 183

Query: 182 GGDFPQCLHGAPLLIPGAETVVRSRLQRWFAEQQIQPKIIGEFDDSALMQAFGQSGSGIF 241
             +FP  L   P+L+P     +R+R+  W   ++I+P+I GEF+DSAL+  F  +G G+ 
Sbjct: 184 ANNFPHSLAVVPVLLPTDHAAMRARIDHWLERERIRPRIAGEFEDSALLSTFAATGMGVM 243

Query: 242 IAPSVIADEVVRQYGVALIGQTVAVTESFYAISVERKVKHPGIVAITE 289
            AP  + + + + +G+  +G T  V E F+ I   RKV HP +  + E
Sbjct: 244 PAPVSLGEHLAQTHGLVQVGTTPDVQEQFHLIYSARKVMHPLLTRLLE 291