Pairwise Alignments

Query, 179 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25-INTG

Subject, 167 a.a., RNA polymerase sigma factor, ECF subfamily from Pseudomonas syringae pv. syringae B728a

 Score = 79.7 bits (195), Expect = 2e-20
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 4/142 (2%)

Query: 24  FLRKRTDNASDAADMTQDVFTQWLDYRDRAKVEQPRAFLFQMARNLLRDHWRKQKVRQTA 83
           +LR+R      AAD+ QD F + L  RD A++ +PRAFL  +A+ +L +H+R+Q +    
Sbjct: 26  WLRRRLGCPHSAADLAQDTFIKVLGARDTAQIVEPRAFLTTIAKRVLCNHYRRQDLEHAY 85

Query: 84  HHDQADRDVEPATDEQNEPMVAAQRLQRLEQLKEVLAELSPRRREALMLHRFEGLSQTQI 143
           +   A+     A  E+   ++    L+ L +L ++L  L    + A +L + +GLS  +I
Sbjct: 86  YQALAELPERVAPSEEERAII----LETLVELDQLLDGLPALVKRAFLLSQVDGLSHGRI 141

Query: 144 AERMGISTSMVEKHIAFALLHC 165
           A  +GIS + V++H+  A L C
Sbjct: 142 AAELGISIATVKRHLHKAALRC 163