Pairwise Alignments

Query, 179 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25-INTG

Subject, 185 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

 Score = 91.3 bits (225), Expect = 9e-24
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 8/163 (4%)

Query: 11  ADAFRGFYTDILYFLRKRTDNASDAADMTQDVFTQWLDYRDRAKVEQPRAFLFQMARNLL 70
           A  FR     ++ FL+ R ++ +DA ++ Q+V+ + L  RD   +  PRA LF++A NL 
Sbjct: 25  AALFREHNRTLVAFLQARLNSRADAQELAQEVYVRMLAMRDADPIAAPRALLFRIAANLA 84

Query: 71  RDHWRKQKVRQTAHHDQADRD--VEPATDEQNEPMVAAQRLQRLEQLKEVLAELSPRRRE 128
            D  R + VR  A  D  D D   +P  ++       A  LQ+  +++  L EL  +  +
Sbjct: 85  VDRLRMRAVRANAPADAPDEDWFAQPIPEQH------ASALQQWREVRAALRELPAKTSK 138

Query: 129 ALMLHRFEGLSQTQIAERMGISTSMVEKHIAFALLHCKRRLQP 171
           A ++H  EG     IA+ M +S  MV  H++ AL HC+ R+QP
Sbjct: 139 AFVMHVIEGRDFGAIAQTMKLSERMVRYHVSNALAHCRARIQP 181