Pairwise Alignments

Query, 771 a.a., TonB-dependent receptor from Pseudomonas fluorescens SBW25-INTG

Subject, 857 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  199 bits (505), Expect = 7e-55
 Identities = 216/871 (24%), Positives = 348/871 (39%), Gaps = 135/871 (15%)

Query: 2   SLLKSLPLAILVAGSSSWSPTQAAETPAPVSKGESAGGELETVTVTARRRTESAQAVPTP 61
           S +K   LA+ V G+ S     A E  AP    E      E + VTA++R +  Q V   
Sbjct: 21  SNMKLSCLAMAVFGAIS-GQVFAEEAQAPEEAKEQKASAFEVIEVTAQKRVQRMQDVGIA 79

Query: 62  MSVIGGQALESQRVYRIQDLQQLVPSVNVAYMHARQSSVS-IRGLGNNPASDGLEGSVGL 120
           +S      LE    Y+   L + +P++ VA        +  IRG+G    +     +  +
Sbjct: 80  ISAFKADELEDLGAYQASALAEFIPNMEVAVSDDSGIPIFVIRGVGLQDYNTNNTPNTAV 139

Query: 121 YIDNVYLGRPGMAVFDLMDIEQLEVLRGPQGTLFGKNTTAGVINISTRAPSF-TPERSIE 179
            +D+VY      + F + D +++EVL+GPQG L+G+N+T G I+ S++ P   T E ++ 
Sbjct: 140 VVDDVYQPYGIYSAFAMFDTDRVEVLKGPQGGLYGRNSTGGAISFSSKRPELETTEANVA 199

Query: 180 TSLGEDGYFQTKGTISGPLTDDLAGRFSAYRTRSDGDIKNEYNGHDLNGGSRQGFRGQLL 239
              G       +   S PL +  A R +     SDG   N Y   D  G  +Q  R  L 
Sbjct: 200 VDYGNYNSLNIRAGASLPLGEVAAVRLAVQSETSDGYYYNTYLNRDQGGKDKQQARFTLH 259

Query: 240 YKPSETF--------------------------NLRWIG-------------DYNEEDSS 260
           Y+P++ F                          N  W G              YN++ + 
Sbjct: 260 YEPADYFAADLRYTYGRDTSEASIPEVTGLLDSNAYWEGPLAGFPGLPSMNIPYNQDGTP 319

Query: 261 AGTRVLYSTG-PTINGTNLYQSRANAAGATLVDGTHRKVNLDSDQHVTVFQGGTSLEANW 319
           A    +  TG P  +  N+  +RA+A G     G   +V+ + D + +V     SL  NW
Sbjct: 320 AYCDAVLQTGIPDASCINM--NRASADGDP-YSGADARVHPNDDTYHSV-----SLNMNW 371

Query: 320 TLPSDFTLTSVSSYRFWNFTPRND-------------------------DGLNVPASYNA 354
              SD++L S+++Y    F  RN                          +G ++   Y  
Sbjct: 372 DF-SDYSLISITNYTQMQFKHRNGVGSVGLGPGQDQEAWEQASRDYGRLNGGDLNEMYVT 430

Query: 355 GVSVEDKQWSQEFRLASPTGGFFDYVLGAYYFGNSLDN-KSFSYYGPQADIWNGTP-AGA 412
               +   WSQE RL S  GG F++++G  Y  ++LD+ ++ S+       W   P  G 
Sbjct: 431 QYDSDTSSWSQELRLLSNYGGDFNWMVGLVYAEDNLDDLRNCSFAANVYADWKQFPGCGT 490

Query: 413 LANVSSVGNGHIRTDSFALFAQGTWHLTERLDFTAGLRGTYEEK----------SAWV-T 461
           +A           T+  + +AQ T+ +++ L  T  LR T E+K            W+ T
Sbjct: 491 MAYTQD-------TEVISGYAQLTYAISDTLSTTVDLRYTQEKKDYVGDVFVNDGTWICT 543

Query: 462 RNAP--------------LGGAAVTGAAATARRGRAGAYDSGDLTQYSTSPSGLLNLSYR 507
            N                +G   VTG    A RG    YD  D       PS  +NL ++
Sbjct: 544 ANGLNTTDPDSPTYCANFIGWDPVTGRYDLA-RGNKSHYDESD-------PSWKVNLDWK 595

Query: 508 FNENLLGYATLSHGEKSGGVNLAVGSAPTAGADSLLIGTERANNVELGFKSTLWDRRLQL 567
              + L YA++    KSGG      + P A         ER N VELGFKSTL D R+Q+
Sbjct: 596 VTPDTLLYASVGSSFKSGGFFGGFLTNPNAIRP---YKPERNNGVELGFKSTLEDYRVQI 652

Query: 568 NANLFWTQVNGYQTNAYDQDNRV----QYLTNAGSVRSRGVEVESTLVPIKGLTLNLNGS 623
           N   F+     +Q+   + D         L N G V  +G E++   +  +   +     
Sbjct: 653 NGAAFYYDYRDFQSAIQEVDQSTGGVFNGLRNLGDVIMQGAELDLRWMATEDFEIRAAIG 712

Query: 624 FNDV---SYLSYKDAPCPPEVSLRPGAPASCDLSGHQVVGASKWIANANGEYKWNLDNGF 680
             D        ++ A    +V +        D+ G+++  A K+  N    Y + L    
Sbjct: 713 LLDTEVDKVTKFESA----DVGITNIFGEVIDIQGNELNNAPKFSGNLIARYHYQLSAEL 768

Query: 681 EPYVTASYAFRSKAVGTVEDSDYGQIPAYAVVNLSTGLRGNYEQGQWDVSLWLKNAFDKT 740
           E ++    +F+     +V +    +   Y +VN+   +    +   W V++W +N  DKT
Sbjct: 769 EGFIQLDASFKDDYWLSVSNEPIYREKGYTLVNMRAEIFSPAD--NWSVAVWGRNLTDKT 826

Query: 741 YYTTLWTGGNGGYEGLLGTPRTLGVTGRYDF 771
           Y  + +  G          PRT GV+  Y++
Sbjct: 827 YRNSFYLDGLDSGYSEYNAPRTFGVSLSYNY 857