Pairwise Alignments

Query, 414 a.a., exonuclease SbcCD subunit D from Parabacteroides merdae CL09T00C40

Subject, 412 a.a., exonuclease subunit SbcD from Rahnella sp. WP5

 Score =  167 bits (422), Expect = 7e-46
 Identities = 112/359 (31%), Positives = 177/359 (49%), Gaps = 27/359 (7%)

Query: 3   LKIIHTADWHLGQTFFGYDRDEEHEAFLSWLIDILTLRQTDVLLIAGDVFDVANPSAAAQ 62
           +++IHT+DWHLGQ FF   R  EH+AFL WL   +   Q D +++AGD+FD  +P + A+
Sbjct: 1   MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLTGQVQQHQVDAVIVAGDIFDTGSPPSYAR 60

Query: 63  RRFFRFLREANRRNPQLQIVIIAGNHDSAARLEAPIPLLEELNTSIVGAVPRTDLCKIDF 122
             + RF+ E  +     Q+V++AGNHDS A L     LL  LNT ++  V        + 
Sbjct: 61  ELYNRFVVELQQTG--CQLVVLAGNHDSVATLNESRELLSCLNTRVIATVGE------NL 112

Query: 123 DSLLIPLYNKEGKREAICLAVPYLRQGDYPASKEGKD------TYVEGVTRMYRQLYDYA 176
              ++ L  ++GK  AI  A+P+LR  D  AS+ G+          E +   Y  L+  A
Sbjct: 113 SEQILVLSQRDGKPGAILCAIPFLRPRDLLASQAGQSGSDKQLALQEAIAAHYDALWQAA 172

Query: 177 DSQRQP---GEALFAMGHLHATGAELSEDDRSERTIMGGLESISVEAFNEDLAYTALGHI 233
            ++R        + A GHL   G   S+  R     +G L++   +AF   + Y ALGHI
Sbjct: 173 QARRDELGMPLPIIATGHLTTVGVSTSDSVRD--IYIGTLDAFPAQAF-PPVDYVALGHI 229

Query: 234 HKAQRVGGRESVRYAGSPLPMSFSEQHYHHQVVAFTLENGCLSDLEAVPIPLRTALHRIP 293
           H+AQ V   E +RY+GSP+ +SF E      V     +   L+ ++ + IP+   +  I 
Sbjct: 230 HRAQCVAKNEHIRYSGSPIALSFDELSKAKSVYLLDFDGATLNAIDTLEIPVFQPMQII- 288

Query: 294 AEPASPAEVLLSLSNLPLAEEGADRSLWPYLEVQVLLTEPDPGFRHRVEEALADKAVRL 352
               S AE+   L+      EG D +   +L+++V   +     + R++    D  V +
Sbjct: 289 --KGSLAEIEHQLAQF----EGGDPAKPVWLDIEVSTQDYLSDIQRRIQALTEDLPVEV 341