Pairwise Alignments

Query, 373 a.a., DNA polymerase III, gamma/tau subunits from Phaeobacter inhibens DSM 17395

Subject, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 20/171 (11%)

Query: 33  QDFLTAFNSDRLHHGWLLTGPQGVGKATLAWRIAAFLLSQPPAEDAGLFGAPPPATSLDI 92
           Q FLT   + ++ H  L+      G   L+  +A   +   P    G  G        D 
Sbjct: 20  QAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGC-GFCKSCQLFDA 78

Query: 93  GMDHPVMHRIQALAEPGLASITRSVNDKGKLRDQIVVDDIRALNKFFGLSATDGGRRVVI 152
           G +HP  ++I+A                     QI VD IR L      +A   GRRV I
Sbjct: 79  G-NHPDFYQIEADGH------------------QIKVDQIRELCSRLSATAQQSGRRVAI 119

Query: 153 VDAADEMNTSAANALLKMLEEPPARTTLLLVSHQPSRLLPTIRSRCRLLRF 203
           +  ++ +N+++ANALLK LEEP   T LLL S  P+RL+ TI SRC+ L F
Sbjct: 120 IHHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPF 170