Pairwise Alignments

Query, 373 a.a., DNA polymerase III, gamma/tau subunits from Phaeobacter inhibens DSM 17395

Subject, 1002 a.a., DNA polymerase III, gamma and tau subunits (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.0 bits (201), Expect = 7e-20
 Identities = 97/326 (29%), Positives = 138/326 (42%), Gaps = 46/326 (14%)

Query: 25  LFGQAQAEQDFLTAFNSDRLHHGWLLTGPQGVGKATLAWRIAAFLLSQPPAEDAGLFGAP 84
           + GQ+        A    RLHH +L TG +GVGK +LA R+ A  L+      A   G  
Sbjct: 18  MVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLA-RLFAKGLNCETGVTASPCGVC 76

Query: 85  PPATSLDIGMDHPVMHRIQALAEPGLASITRSVNDKGKLRDQIVVDDIRALNKFFGLSAT 144
                +  G       R   L E   AS T+             VDD R L        T
Sbjct: 77  GSCVEIAQG-------RFVDLIEVDAASRTK-------------VDDTRELLDNVQYRPT 116

Query: 145 DGGRRVVIVDAADEMNTSAANALLKMLEEPPARTTLLLVSHQPSRLLPTIRSRCRLLRFA 204
            G  +V ++D    ++ S+ NALLK LEEPP     LL +  P +L  T+ SRC      
Sbjct: 117 RGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLK 176

Query: 205 PLSPED----MQAALTQAGAELPRQAEHLAAL---ANGSVGAALRLLNL-----GGLQAY 252
            L+ ++    +Q  LTQ   +LP + E L  L   ANGS+  AL L +      GG    
Sbjct: 177 SLTQQEIGTQLQHILTQ--EQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVML 234

Query: 253 SDVVRLLDSMPR---LDRQRAMTLAE-----QAAAR---GGADKFELLLTLIDTALARLA 301
           + V  +L S+     L   +A+T A+     Q+ A+    GAD  E+L +L++       
Sbjct: 235 NQVQSMLGSIDEQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITL 294

Query: 302 RTGATGMAPQPEAAPQEAAVLSRLSP 327
              A   A Q   + Q  A   +L+P
Sbjct: 295 TQFAPAAAQQSLYSAQIQAFAEQLAP 320