Pairwise Alignments

Query, 1151 a.a., putative chromosome segregation protein SMC from Phaeobacter inhibens DSM 17395

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score =  206 bits (525), Expect = 7e-57
 Identities = 271/1251 (21%), Positives = 520/1251 (41%), Gaps = 177/1251 (14%)

Query: 4    SKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMED 63
            S++ +  FKSF + + L I DG T ++GPNG GKSN ++ + +V+G+   K++R G    
Sbjct: 5    SEIHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQ 63

Query: 64   VIFAGTSSRPARNFAEVSLQIDNSERLAPSGFNESDNLEILRRITRDVGSAY-------- 115
            +I      R   NFAEV+L  DN +R  P    +SD + I R++  +  + Y        
Sbjct: 64   LITYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIWNEEK 118

Query: 116  --KTNG----------KDVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKARRRI 163
              K NG          K V+  ++  +    S  A    ++ QG + ++I+  P  RR+I
Sbjct: 119  EVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKI 178

Query: 164  LEEAAGISGLYQRRHEAELKLKNTEQNLLRVDDVIEQLAAQLSQLARQARHAQRYRDIGE 223
            ++E +G++   ++  +A+ +L+   + + ++D  I ++   L +L ++   A+ +  + E
Sbjct: 179  IDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTE 238

Query: 224  QLRRAEGMLLYRRWREADDARLEA--EDILRTRETQAAKAEALARVADGKRLEAESALPP 281
            +L+  + +L  ++  E  +  LE   E+I   +E +    + ++   D K  +  + L  
Sbjct: 239  ELKATKYILTSKKI-EFLNGILEKTKEEIEALKEMKVCFLKEISEY-DAKSNDIRNRLQN 296

Query: 282  L---------------------------REEEAIAAAV--LQRLFVQRDALSDQEAQARQ 312
            L                            +++++  A+  L+ +  Q +       + RQ
Sbjct: 297  LINELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQ 356

Query: 313  TIETLTNRVAQLGRDIERESGLNRDAGETIERLDWEQRELARAAIGHDDRMAEA------ 366
             IET+     Q      +E+ +N    E +E L+ E+++L ++ +   +   E       
Sbjct: 357  KIETIRTETLQ------KEAEINALKTE-MENLETEKKKL-KSKVEESETQTEILKQQER 408

Query: 367  --AERSREAGSVLQAREEHLTSLTEDVARLAARHQSAQRQVEDCRRGLLRAEEEGGASRD 424
              +ER  E+ + L   +    +L  ++ + +      +  +E  ++ L     E   ++ 
Sbjct: 409  KLSERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKS 468

Query: 425  AMVEAGDTLAQAEAAFEAAIEAEEEARAAAELADEALA------AADEARNDTQSREAEA 478
               E  D   + E + +  +   E  +   +  D++ A      A  +A  D +    + 
Sbjct: 469  LYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLD- 527

Query: 479  RARRSEAEGELGALRAEVTALAKL-VERDTA---EGGHVLDEMRV------AAGYEKALG 528
            RA +S  E +L  +      L K   E  TA    GG+ L+ + V      A   +    
Sbjct: 528  RAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKK 587

Query: 529  AALADDLRAPLAEVDGPSGWVTLPPYDGDAPLPAGAVPLSLHVSSPDALHRRI--SQVGL 586
              L      PL  ++GP        Y  D  +   A+ L       + L R +  + + +
Sbjct: 588  NNLGRTTFLPLDRINGPEAL-----YLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIV 642

Query: 587  VDADAARDLHSRLMPGQRLVTLEGDLWRWDGFRAWAEDAPSAAALRLEQMNRLEVLKQDM 646
             + D A+ L        R VTLEG++    G          +        ++LE L +D+
Sbjct: 643  ENLDYAKTLSKDHRA--RFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAEDI 700

Query: 647  EHVGARADGAKAAHEVLMRKLAEVTTADQTARQARRVADQRVADAARALSRAESHRNLSE 706
              +       K   E L  K A  +T              R  +    L   +   +  E
Sbjct: 701  SELDGTLSETKDEIERLQNKNATYST--------------RKMELESRLKIIKDLEHKKE 746

Query: 707  GKLETLSIAVARHDEDAAAAQAHLTEAEAAVEGLEDLAEARAK---------------VE 751
            G L    + +   + ++   +  L   E + E LE   E   K               + 
Sbjct: 747  GILTNNGVKIKELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIA 806

Query: 752  DIKQAVEAARITMLTHRSTQDELRR-EGEARTARGQQVTKDLSGWRHRLESADRRIAELT 810
              + +  + RI ++       E ++ E E    R   + K++     ++   +  I EL+
Sbjct: 807  SFENSEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVL--IPKISELNSNIKELS 864

Query: 811  ERRAATEEELQ-------EAHQVPAEIAETHEELNLAIEEAEARKAVASDALIGAETVLR 863
            E+R   E+ +Q       +  ++     E +E+L   + E   +K               
Sbjct: 865  EKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAF------------ 912

Query: 864  DAVQNERECARLASEAREARAR---SEARCDAAREAVGHAEARIREEQQTVPDALLASLD 920
                 E+E   L  E R    R   +E++ ++        E R+ EE + +   +  +++
Sbjct: 913  -----EKELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKL--YVCENIE 965

Query: 921  ATPEDMPN------AEELEAEVNRHKRQRDALGAVNLRAEEDARTVQDEHDQLVREKADL 974
               ED+ +       + LE+     +     L  VN+RA +D + + D +D+L  ++ D 
Sbjct: 966  QISEDITSKIKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDY 1025

Query: 975  EEAVKTLRSGIASLNREGRERLLTAFEEVNASFTMLFTHLFGGGEANLVMVESDDPLDAG 1034
            E   K     I  +++  +E  +  + +V  ++  ++T +  GG   L +   +DP   G
Sbjct: 1026 ENEEKKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGG 1083

Query: 1035 LEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLSNPAPICVLDEVDAPLDDANVTRF 1094
            L I   P  KKL +L ++SGGE++LTA+A +FA+   NPAP  VLDEVDA LD    T+ 
Sbjct: 1084 LLIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALD----TKN 1139

Query: 1095 CDLLDEMCRQT--DTRFLIITHHAVTMARMDRLFGVTMQEKGVSQLVSVDL 1143
              L+ EM +    D++F++I+H    +++ D ++GV M E G+S+LV + +
Sbjct: 1140 AGLIGEMIKNASKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189