Pairwise Alignments

Query, 1151 a.a., putative chromosome segregation protein SMC from Phaeobacter inhibens DSM 17395

Subject, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

 Score = 50.4 bits (119), Expect = 7e-10
 Identities = 45/227 (19%), Positives = 103/227 (45%), Gaps = 17/227 (7%)

Query: 1   MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60
           M    +++  F+S  + T +  + G+T ++G NG GKS++ +A+ + +   R    R   
Sbjct: 1   MIIKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFR--- 56

Query: 61  MEDVIFAGTSSRPARNFAEVSLQIDNSERLAPSGFNE--SDNLEILRRITRDVGSAYKTN 118
           +E+++  G +S       E+   + N+  +    F     D L +  ++  +  S     
Sbjct: 57  IENLMQQGAASFSVELEFEM---MGNTYLVKRKRFQHKTDDKLYVNGKLNAESAS----- 108

Query: 119 GKDVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKARRRILEEAAGISGLYQRRH 178
             ++  +  ++L  D S  +++   ++QG+IA LI   P+ R+ ++ +  GI    +   
Sbjct: 109 --EINKKIEEILEIDNSVFSNA-IYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASE 165

Query: 179 EAELKLKNTEQNLLRVDDVIEQLAAQLSQLARQARHAQRYRDIGEQL 225
           +  +  K+ E+ LL+++  + Q    L  L +          + E++
Sbjct: 166 KMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEI 212



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 55/309 (17%), Positives = 120/309 (38%), Gaps = 31/309 (10%)

Query: 710  ETLSIAVARHDEDAAAAQAHLTEAEAAVEGLEDLAEARAKVEDIKQAVEAARITMLTHRS 769
            E ++I    ++E     +  LT+    +E LE L    ++ E +K+ +      +   + 
Sbjct: 165  EKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKL 224

Query: 770  TQDELRREGEARTARGQQVTKDLSGWRHRLESADRRIAELTERRAATEEELQEAHQVPAE 829
             ++    + E + A   Q+ ++L      +++ +  I           EE +   +   E
Sbjct: 225  EKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNISE-NEE 283

Query: 830  IAETHEELNLAIEEAEARKAVASDALIGAETVLRDAVQNERECARLASEAREARARSEAR 889
              + + EL L I+E    K +   +   +   L+     E    +     +E+   ++  
Sbjct: 284  NYKKYLELELKIKELN-NKLIGHKSNYESYNKLKTI---EESLLKELGVLKESLKDNKKN 339

Query: 890  CDAAREAVGHAEARIREEQQTVPDALLASLDATPEDMPNAEELEA---EVNRHKRQRDAL 946
             D  +E        ++E      D  +  LD   E +   E +E    E+  HK+  + L
Sbjct: 340  PDELKE-------NLKEN-----DEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETL 387

Query: 947  GAV------NLRAEEDARTVQDEHDQLVREKADLEEAVKTLRSGIASLNREGRERLLTAF 1000
                     +++  E+ +T ++ ++ L++EK DLE+ ++        L  E     LT F
Sbjct: 388  FDSVKIYDDSIKTFEELKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISE-----LTDF 442

Query: 1001 EEVNASFTM 1009
            E++     +
Sbjct: 443  EKIEEKINL 451