Pairwise Alignments

Query, 353 a.a., ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

Subject, 381 a.a., sugar ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  346 bits (887), Expect = e-100
 Identities = 197/363 (54%), Positives = 249/363 (68%), Gaps = 19/363 (5%)

Query: 1   MTGVTLAKAVKKYGDVQ-VIHDVDLSIDDGEFCVFVGPSGCGKSTLLRMIAGLEETSSGN 59
           M  +TL  A K YGD   VI +VDL I + EFCVF+GPSGCGKSTLLR IAGLE+ +SG+
Sbjct: 1   MASITLRAAQKAYGDAPPVIRNVDLDIGEHEFCVFLGPSGCGKSTLLRSIAGLEDLTSGD 60

Query: 60  IHIGDRDVTRLDAADRGVAMVFQSYALYPHMTVEDNMGFGLKMNGHPKEKIREKVAEASR 119
           + IG + V  + +A R VAMVFQSYAL+PHMTV +NM FGL +   PK +I +KV EA+R
Sbjct: 61  LFIGGKRVNDVPSAQRSVAMVFQSYALFPHMTVYENMSFGLTLAKLPKAEIEQKVREAAR 120

Query: 120 ILKLDDYLKRKPKALSGGQRQRVAIGRAIVRGPEVFLFDEPLSNLDAELRVDMRVEIARL 179
           IL+L++ L+RKPK LSGGQRQRVAIGRAIVR P VFLFDEPLSNLDA LR   R+EIARL
Sbjct: 121 ILQLEELLQRKPKELSGGQRQRVAIGRAIVRRPGVFLFDEPLSNLDATLRSQTRIEIARL 180

Query: 180 HKEI-GATMIYVTHDQVEAMTLADKIVVLRA-------GRVEQVGSPMELYANPDNRFVA 231
           H++   A+++YVTHDQVEAMTLAD+IV+L A       G + QVG+PMELY +P NRFVA
Sbjct: 181 HRQFEQASVVYVTHDQVEAMTLADRIVLLHAGADTQRFGSIAQVGTPMELYHHPRNRFVA 240

Query: 232 GFIGSPSMNFLEGTVQG---DGVVV---PALENRRVATSVALPADGSKVLLGLRPQHLSV 285
           GFIGSP MNFL   V G   +G++V    + E   VA   AL   G  V +G+RP+H+ +
Sbjct: 241 GFIGSPRMNFLPAQVAGVQENGILVRLSGSEETLLVAAQGAL-QPGQMVTVGVRPEHMEI 299

Query: 286 TAADSSLV---LDLRERLGGVSYDYLSTPTGEKLIVETRGDEALPEGTAVALGFDDADAY 342
            +     +   + L ERLG  +Y +L  P G+ L+ +  GD  +  G  V +    A AY
Sbjct: 300 GSQGQYGIHREVVLVERLGEQTYVHLDEPAGQPLVAKAAGDARITRGERVRVAIAPACAY 359

Query: 343 IFD 345
           +FD
Sbjct: 360 LFD 362